| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0388 |
|---|
| Symbol | |
|---|
| ID | 3961602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 395956 |
|---|
| End bp | 397764 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915221 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_521673 |
|---|
| Protein GI | 89899202 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTC AAGGCAGGCG CATGGAAAGA CCCGTCGTCA TTCACAAGGT TGCATCGGAC
TTGCGCCTGT CACCCAATTG GGTGGATTAC GAGGCTGGAC GGCGCGTTGA CGTGTGGGCT
GATGCCCGGC ACGCCTTGCA GGGCCTGCCC GGCGGTGGCC TGAACCTTGG CTTCGAGGCC
GTGGACCGCC AGGCCGCGGG CGCCCTGCGC GATCACGTCG CACTGCGTTT TGTCGCGCGC
AACGCACCTC CACTGGACTT GCGCTACTTT GAGTTGGCCC AGCAAACGAA TCGCTTTGCC
AACGTCTTGC GCAGTCTGGG CGTGGGCAAG GGCGATCACC TGTTTGTGCT GGCCGGACGT
ATTCCCGAAC TGTACGTTGC GGTGCTGGGC GCGCTGAAGA ATGGCAGCGT GGTGACCCCG
CTGTTTTCCG CCTTTGGCCC GGAGCCAATC GCCGCCCGCA TCCAGCTTGG CGCGGGCCGG
GTGCTGGTGA CCACCGACGC ACTCTACCAA CGCAAGGTGA AGCAAATTCG GGCGCAAACG
CCCACCCTTG TGCACGTGCT GCTGGTGGCC GAGGACGGTG GCATCACCAA TGAGCCGGAC
ACACTGGATC TTGGCACGCT GATGGCGTCG GCTTCTGACA CCTTCAGCAC CGTCGAGACG
CAGCCGGACG ACCCTGCCCT GTTGCATTTC ACCAGTGGCA CCACCGGCAC ACCCAAAGGC
GCGCTGCATG TGCACGAGGC CGTGGTGACC CACTTTGCCA CCGGTCGCTA CGCGCTTGAT
TTACACCCGC AGGATCGCTA CTGGTGCACG GCTGATCCCG GCTGGGTCAC CGGCACCTCC
TACGGCATCA TCGCGCCCCT GCTGCAGGGC GTCACCTCGC TGATTGATCG CGAGGAATTT
GATGCCGAGC GCTGGTACAC GCTGCTGGAA CAGGAGCGCA TCAGCGTCTG GTACACCGCG
CCGACCGCGA TTCGCATGTT GATGAAAGCC GGCACCGAGC TGGCGCAGCG CCACAGCCAT
CCAGACCTGC GCTTTATCGC CAGCGTCGGT GAACCGCTGA ACCCGGAGGC GGTCTGGTGG
GGCCAGGAGG CGCTGGGCTT GCCGATTCAC GACAACTGGT GGCAGACCGA GACCGGCGGC
ATCATGATCG CCAACACCCC GGCCTTCGAC ATCAAACCCG GCTCCATGGG CCGCCCCTTG
CCCGGCATTG ACGCCTGCAT CGTCGAGCAC CTGGAAGCCG AGGGTGAGCC GGCGCGGGTG
CGCGTCATTG AGGAGGCCAA TGTCGAAGGC GAACTCGCGC TGAAACGCGG CTGGCCGTCC
ATGTTTCGTG CCTACCTCAA CAACGAGGCC CGTTACCGCA AGTGTTTCGC CGGTGAGCTG
TACCTGACCG GCGATCTGGC CAAGCGCGAT GCCGATGGCT ATTACTGGTT CGTCGGCCGT
GCCGATGACG TCATCAAGTC AGCCGGGCAC CTGATCGGGC CGTTCGAGGT CGAGAGCGTG
CTGATGGAGC ACCCGGCGGT GGCCGAGGCC GGCGTCATCG GCAAGCCCGA TCCGGTGGTC
GGTGAGGTGG TCAAGGCGTT TGTCTCGCTC AAGGACGGCT ACCAGGCCGG CGAGACCTTG
CGCCTGGACA TCTCGGCCCA CGCGCGCCGA CGGCTCGGTG CCGCCGTGGC ACCCAAGGAG
ATCGTCTTTT TGCCCACGCT GCCGCGCACG CGCAGCGGCA AGATCATGCG CCGCCTGCTC
AAGGCGCGTG AACTCGGGCT GCCCGAGGGC GACACCTCGA CCCTGGAGGG TGGCGCATGG
ACAAAATGA
|
|---|
| Protein sequence | MLSQGRRMER PVVIHKVASD LRLSPNWVDY EAGRRVDVWA DARHALQGLP GGGLNLGFEA
VDRQAAGALR DHVALRFVAR NAPPLDLRYF ELAQQTNRFA NVLRSLGVGK GDHLFVLAGR
IPELYVAVLG ALKNGSVVTP LFSAFGPEPI AARIQLGAGR VLVTTDALYQ RKVKQIRAQT
PTLVHVLLVA EDGGITNEPD TLDLGTLMAS ASDTFSTVET QPDDPALLHF TSGTTGTPKG
ALHVHEAVVT HFATGRYALD LHPQDRYWCT ADPGWVTGTS YGIIAPLLQG VTSLIDREEF
DAERWYTLLE QERISVWYTA PTAIRMLMKA GTELAQRHSH PDLRFIASVG EPLNPEAVWW
GQEALGLPIH DNWWQTETGG IMIANTPAFD IKPGSMGRPL PGIDACIVEH LEAEGEPARV
RVIEEANVEG ELALKRGWPS MFRAYLNNEA RYRKCFAGEL YLTGDLAKRD ADGYYWFVGR
ADDVIKSAGH LIGPFEVESV LMEHPAVAEA GVIGKPDPVV GEVVKAFVSL KDGYQAGETL
RLDISAHARR RLGAAVAPKE IVFLPTLPRT RSGKIMRRLL KARELGLPEG DTSTLEGGAW
TK
|
|---|
| |