Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0378 |
Symbol | |
ID | 3964280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 385562 |
End bp | 386215 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915211 |
Product | 17 kDa surface antigen |
Protein accession | YP_521663 |
Protein GI | 89899192 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAC TACTTTTATT GTCTGCAGCC ATGGTCAGCA GTGGGCTGAG TCTGGCGCAG GAGGTGGGCC ATGTCATTTC CGCCACACCC GTCATGCAAC AGGTCGGCAT CCCGCGTCAG GTGTGCAGCA CCGAGCAGGT GGCGGTCCAG CCCGCCAAAT CAGGCGCCGG CGCCGTCATG GGCGCCATTG CCGGGGGCGC TATGGGGAAC GCCGTGGGTG GGGGCGGCGG CAAGGCAGCT GCCACCATGC TCGGCATTGT CGGTGGCGCC GTCCTGGGCG ACCGGATTGA AGGGGCGCCG GCAGCAGAAA TTCAGAACGT GCAGCGTTGT GCAATGCAGA CCTTTTTTGA GAACCGGCCA GTGGCCTACA ACGTGGTGTA TGAATTTGGC GGTAAACAGT ATTCTGTCCA AATGCCGAAC GACCCGGGGC CGACCATTGA ACTGCAAATT ACACCCGTCG GCGCAGGCAC CCCATGGCAG GAACCTGCCA ATGCGACCAG CTATGTCCAG CCATCCTATG GTCCGCCTGC CAATGTGGTG CTCATGCCAC CCGCCTATCC CGGGTATTAC GCCCGGCCCT ATTACCCACC GGTGGGGATC GAGTTTGATT TTGGCTACCG CGGCGGTTAT GGCGGTCGGC GGCACTGGCG CTGA
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Protein sequence | MKKLLLLSAA MVSSGLSLAQ EVGHVISATP VMQQVGIPRQ VCSTEQVAVQ PAKSGAGAVM GAIAGGAMGN AVGGGGGKAA ATMLGIVGGA VLGDRIEGAP AAEIQNVQRC AMQTFFENRP VAYNVVYEFG GKQYSVQMPN DPGPTIELQI TPVGAGTPWQ EPANATSYVQ PSYGPPANVV LMPPAYPGYY ARPYYPPVGI EFDFGYRGGY GGRRHWR
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