Gene Rfer_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0378 
Symbol 
ID3964280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp385562 
End bp386215 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID637915211 
Product17 kDa surface antigen 
Protein accessionYP_521663 
Protein GI89899192 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC TACTTTTATT GTCTGCAGCC ATGGTCAGCA GTGGGCTGAG TCTGGCGCAG 
GAGGTGGGCC ATGTCATTTC CGCCACACCC GTCATGCAAC AGGTCGGCAT CCCGCGTCAG
GTGTGCAGCA CCGAGCAGGT GGCGGTCCAG CCCGCCAAAT CAGGCGCCGG CGCCGTCATG
GGCGCCATTG CCGGGGGCGC TATGGGGAAC GCCGTGGGTG GGGGCGGCGG CAAGGCAGCT
GCCACCATGC TCGGCATTGT CGGTGGCGCC GTCCTGGGCG ACCGGATTGA AGGGGCGCCG
GCAGCAGAAA TTCAGAACGT GCAGCGTTGT GCAATGCAGA CCTTTTTTGA GAACCGGCCA
GTGGCCTACA ACGTGGTGTA TGAATTTGGC GGTAAACAGT ATTCTGTCCA AATGCCGAAC
GACCCGGGGC CGACCATTGA ACTGCAAATT ACACCCGTCG GCGCAGGCAC CCCATGGCAG
GAACCTGCCA ATGCGACCAG CTATGTCCAG CCATCCTATG GTCCGCCTGC CAATGTGGTG
CTCATGCCAC CCGCCTATCC CGGGTATTAC GCCCGGCCCT ATTACCCACC GGTGGGGATC
GAGTTTGATT TTGGCTACCG CGGCGGTTAT GGCGGTCGGC GGCACTGGCG CTGA
 
Protein sequence
MKKLLLLSAA MVSSGLSLAQ EVGHVISATP VMQQVGIPRQ VCSTEQVAVQ PAKSGAGAVM 
GAIAGGAMGN AVGGGGGKAA ATMLGIVGGA VLGDRIEGAP AAEIQNVQRC AMQTFFENRP
VAYNVVYEFG GKQYSVQMPN DPGPTIELQI TPVGAGTPWQ EPANATSYVQ PSYGPPANVV
LMPPAYPGYY ARPYYPPVGI EFDFGYRGGY GGRRHWR