| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0372 |
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| Symbol | |
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| ID | 3964274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 378967 |
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| End bp | 380472 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915205 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_521657 |
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| Protein GI | 89899186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAC TTCCTCTAAT CCAACACCTG ATCGACGGCC AGCTGGTCGC GGGTGGCACT
CGCTCGGTTG ACGTTTTCAA CCCCGCCACC GGTCAGGCTG AAAAACGCGT GCTGCTGGCC
GACAAACACA CGGTCGAGCA AGCCATTGCC AGTGCCCACG CCGCTTACCC GGCCTGGCGC
GCGACGCCGC CGCTCAAGCG TGCCCGCGTC ATGAGCAAGC TCAAAACACT GCTGGAAGAC
AACGCCGAGC GACTCTGCGC CCTGCTCACC GCCGAGCACG GCAAGGTGCT GAGCGACTCC
ATGGGCGAGT TGCAACGCGG CATTGAAAAC GTCGAATACG CCTCTTATGC GCCGGAGCTG
CTCAAAGGCG AACACAGCAA GAATGTGGGT CCGTCGATGG ACTCGTGGAG CGAATTCCAG
CCGCTGGGCG TCACCGCCGG CATCACCCCG TTCAACTTTC CCGTCATGGT GCCGCTGTGG
ATGTGGCCGA TGGCGATTGC CTGCGGCAAC ACCTTTGTGC TCAAACCGTC CGAGCGCGAC
CCCTCAAGTG CCTTGTTGGT GGCCGAACTG GCGCTGCAGG CCGGCCTGCC ACCGGGCGTG
CTCAATGTGG TCAACGGCGA CAAGGAAGCT GTGGATGCGC TCTTGACCGA CAAGCGCGTG
CAGGCCATCA GCTTTGTCGG CTCGACCCCG ATTGCCGAGT ACATCTATGC CACCGGTTGT
GCCCACGGCA AACGCGTGCA AGCCCTGGGC GGCGCCAAGA ACCACGCGGT GGTGATGCCC
GACGCTGACA TCGCCAATGC CGTGAACGCC TTGATGGGCG CGGCTTACGG CTCGTGCGGC
GAGCGCTGCA TGGCGATTCC GCTGGTCGTC GCCGTGGGCG ATGCCACCGC CGACGCGGTG
CTGGCGGGCC TGAAAGCCGA GATCGCCAAA ATGAAAGTGG GTCCCGGCAC CGATAGCGCC
AATGACATGG GCCCGCTGGT CACCAAAGCG CACCTTGACA AGGTCAAGGG TTTTGTGGAC
CAGGGTGTCC AGGAGGGCGC CACGCTGGTG GTGGATGGCC GCAATGTCCA GGTAGCAGGC
CATGAGAGCG GCTACTTCAT GGGCGCTTGC CTGTTTGACC ACGTCAAGCC TGGCATGAAG
ATTTACCAAG AGGAGATCTT TGGCCCGGTA CTGGGTGTCG TGCGCGTCAA GACCTTGCAG
GAAGGCATGG ACCTGATCAA CGCCCACGAA TACGGCAACG GCACCTGCAT CTTTACCCGC
GACGGCGAAG CGGCCCGCTA CTTCAGTGAC CACATTCTGG TCGGCATGGT CGGCGTCAAC
GTGCCGCTGC CGGTGCCGGT GGCGTATCAC TCGTTTGGCG GCTGGAAGCG CTCCTTGTTT
GGTGACCTGT CAGCTTACGG GCCGGATGCC GTGCGCTTCT ACACCAAGCG CAAGACCATC
ACCCAGCGTT GGCCCTCAGC GGGGGTGCGT GAGGGGGCGG TCTTCAGTTT TCCGACCAAT
CGCTAG
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| Protein sequence | MNELPLIQHL IDGQLVAGGT RSVDVFNPAT GQAEKRVLLA DKHTVEQAIA SAHAAYPAWR
ATPPLKRARV MSKLKTLLED NAERLCALLT AEHGKVLSDS MGELQRGIEN VEYASYAPEL
LKGEHSKNVG PSMDSWSEFQ PLGVTAGITP FNFPVMVPLW MWPMAIACGN TFVLKPSERD
PSSALLVAEL ALQAGLPPGV LNVVNGDKEA VDALLTDKRV QAISFVGSTP IAEYIYATGC
AHGKRVQALG GAKNHAVVMP DADIANAVNA LMGAAYGSCG ERCMAIPLVV AVGDATADAV
LAGLKAEIAK MKVGPGTDSA NDMGPLVTKA HLDKVKGFVD QGVQEGATLV VDGRNVQVAG
HESGYFMGAC LFDHVKPGMK IYQEEIFGPV LGVVRVKTLQ EGMDLINAHE YGNGTCIFTR
DGEAARYFSD HILVGMVGVN VPLPVPVAYH SFGGWKRSLF GDLSAYGPDA VRFYTKRKTI
TQRWPSAGVR EGAVFSFPTN R
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