Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0368 |
Symbol | |
ID | 3962495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 374558 |
End bp | 376585 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637915200 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_521653 |
Protein GI | 89899182 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCAA CAAAGCCACC CGTTTTCAGC CACATCATCA AACGCGACGG TGGCATCAAG CCGTTTGACG GCGCCAAAAT AGCCCACGCC CTGGCACGCG CCGCCCAGGT CAGCGGTGAG TTTGACGATA CCGAGGCGCA GCGACTGACC CACTACCTGG TGCTTCCAAA AATCAAGGTA CACGGTCAAG TCACCCCGCA CATTGAGCAG ATTCAGGACG CGGTCGAATC TGCCCTGTTT GACGCCGGTT ACCCCAAGAC GCTGCGCGCC TACATCGTTT ATCGCGAGCA GCACCACAAA TTGCGCAGCG ATCGCAAAAC CCTGGTTGAT GTCGAGTCGA GCATGAACGA GTACCTGCAG CAGTTGGACT GGCGCGTCAA CGCCAATGCC AACCAGGGCT ACTCGCTCGG TGGACTGATC CTCAACGTCT CGGGCAAGGT CATTGCCAAT TACTGGCTCA ATCACGTCTA CCCGCCCGAA GTCGGCGCCG CGCACCGCAG TGCGGCGATC CACATTCACG ACCTGGACAT GCTCGCCGGT TATTGTGCGG GCTGGTCGCT GCGCACGCTG CTGCATGAAG GCCTGAATGG CGTGCCGGGC AAGGTCGAAT CGGGGCCCCC GAAGCACCTG TCGAGCGCGG TCGGACAGAT CGTCAACTTC CTGGGCACGC TGCAAAATGA GTGGGCCGGG GCGCAAGCCT TCAGTTCCTT CGACACCTAC ATGGCACCTT ACGTCCGGCA GGACAAACTG AGCTACGACG AGGTCCGCCA GAGCCTGCAA GAGCTGATCT ACAACCTCAA TGTGCCCTCG CGCTGGGGCA CGCAAACGCC TTTTACCAAC CTGACCTTTG ACTGGGTCTG TCCGCAAGAC TTGCGCGAGC AAATTCCCGT GATTGCGGGA AAGGAGATGG CGTTCAGCTA CGGTGAACTG CAGCCTGAGA TGGACATGAT CAACCGTGCC TACATTGAAA TCATGATGGC CGGGGATGCC AAGGGGAGGG TGTTTACCTT CCCGATTCCG ACCTACAACA TCACCGAAGA CTTTGACTGG TACAGCACCA ATGCGGAGCT GCTGTTCGAA ATGACCGCCA AATACGGTTT GCCCTACTTC CAGAATTTCA TCAATTCGGA ACTCAAGCCC AACATGATCC GCTCCATGTG CTGTCGCCTG CAGCTGGACC TGCGCGAGCT GCTCAAGCGC GGCAACGGCC TGTTCGGCTC GGCCGAGCAG ACCGGCTCGC TCGGCGTGGT CACGATCAAC TGCGCGCGCT TGGGGTATCT GCACCGCGGC GACGAAGCGG CCATGCTGGC GGCGCTTGAC GCCCTGCTGG AACTCGGCCG CGACAGCCTG GAGATCAAGC GCAAGGTGAT CCAGCGCCAC ATGGACAACG GCCTGTTCCC CTACACCAAG CGCTACCTGG GCACGCTGCG CAACCACTTC TCCACGCTGG GGGTGAACGG TATCAACGAG ATGATCCGCA ACTTCACGCA GGACAAGTAC GACATCAGCG GCGAGTGGGG TCACGCTTTT GCGGTGCGCC TGCTCGACCA TGTGCGCGCC CGCATGCTCG AATTCCAGGA CCAGACCGGC CACATGTACA ACCTGGAGGC GACACCGGCC GAAGGCACGA CCTACCGCTT TGCCAAGGAA GACGCCAAAC AGTTCCCGGA CATCCTGCAG GCGGGCACCA AGGACATGCC CTACTACACC AACTCCAGCC AACTGCCGGT GGGCTTTACC GACGATCCGT TTGAGGCGCT GGAACTGCAG GACGATCTGC AGCGCAAGTA CACCGGCGGC ACCGTCTTGC ACCTGTACAT GACCGAGCCC CTGAGCAGCG CCGAGGCCTG CCGCCAACTG GTCAAGCGTT CGCTGTCGCG TTTTCACCTG CCCTACATCA CCGTGACGCC CACCTTTTCG ATCTGCCCGA AACATGGCTA CCTGGGCGGA CGGCATGACT TTTGCCCCAA ATGCGACGCC GACCTCATTT CGCGCAAACA ACTCGAAACC AATACCCAAG GAGACTGA
|
Protein sequence | MSATKPPVFS HIIKRDGGIK PFDGAKIAHA LARAAQVSGE FDDTEAQRLT HYLVLPKIKV HGQVTPHIEQ IQDAVESALF DAGYPKTLRA YIVYREQHHK LRSDRKTLVD VESSMNEYLQ QLDWRVNANA NQGYSLGGLI LNVSGKVIAN YWLNHVYPPE VGAAHRSAAI HIHDLDMLAG YCAGWSLRTL LHEGLNGVPG KVESGPPKHL SSAVGQIVNF LGTLQNEWAG AQAFSSFDTY MAPYVRQDKL SYDEVRQSLQ ELIYNLNVPS RWGTQTPFTN LTFDWVCPQD LREQIPVIAG KEMAFSYGEL QPEMDMINRA YIEIMMAGDA KGRVFTFPIP TYNITEDFDW YSTNAELLFE MTAKYGLPYF QNFINSELKP NMIRSMCCRL QLDLRELLKR GNGLFGSAEQ TGSLGVVTIN CARLGYLHRG DEAAMLAALD ALLELGRDSL EIKRKVIQRH MDNGLFPYTK RYLGTLRNHF STLGVNGINE MIRNFTQDKY DISGEWGHAF AVRLLDHVRA RMLEFQDQTG HMYNLEATPA EGTTYRFAKE DAKQFPDILQ AGTKDMPYYT NSSQLPVGFT DDPFEALELQ DDLQRKYTGG TVLHLYMTEP LSSAEACRQL VKRSLSRFHL PYITVTPTFS ICPKHGYLGG RHDFCPKCDA DLISRKQLET NTQGD
|
| |