| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0348 |
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| Symbol | |
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| ID | 3961387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 347496 |
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| End bp | 348983 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915180 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_521633 |
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| Protein GI | 89899162 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTCCG AATATTTATT GACAGAAATT GCACGCCTGG GCTTGCAGAC CAAGCTGCCG
CTGCACCGAC AGTTATATGA AGCGCTGCGC CGCGCCATGC TGGATGGCAA ATTGTGCGCA
GGTCAGCGCC TGCCGTCCAG TCGCGAATTG ACGCAGGATT TGGGCCTGTC GCGCAATACC
GTGGTGGCGG CACTCAACCA GTTGGCCGTC GAGGGCTATC TGGTCAGCCA TATCGGCAGC
GGCACTTTTG TCAATGACAG CGTCCCCAAG GTTGCGCCCC GCCACCGGAC AGCCCACGAG
AAGCAGGGTG CAACATTGTC CCGACGTGGA CGGGCGCTGG CGACGACGTT TTGTGCCACG
CAACTTGAGA TTCAGCCGTT TACCCCCGGT ATCGCCGACT TCAGCGCTTT TCCCGTGGCT
TTATGGCAGC GCCTGCAAAA CAAGCACTGG CGCATGACCT ATCCCGACAT GCTGGACTAC
AACTTTTCCG GCGGCTACTG GCCGCTGCGC CGGGCCGTTG CCGACTATCT GCGCGTCTTT
CGCAGCGTGC CGCTTGATGT CGATCAAGTC ATCATTACCA GCGGCACCCA ACAGTCGATG
GAACTGTGCG CACAGCTACT CGCCGACCAC TCTGATACCG TCTGGCTGGA GGACCCGGCC
TATTGGGGTG CCATCAAAGC CTTTATGGCG ACCGGTTTGA ACCTGCATTC AGTGCCGGTC
GATCAGGAAG GTATTGCACC CCAAGCCGAG GACGAAGCCG TGCCGCCACG CCTGATCTAT
GTGACGCCAT CCCACCAGTA CCCGACCGGT GCCGTGATGT CGCTGGCGCG GCGGCACCAG
ATTTTGTCGA TTGCCCGCCG CCACAAAGCC TGGGTTCTGG AAGACGACTA TGACAGTGAA
TTCCGTTTTA GCGGACCACC GATTTCGTCA CTGGCCGGCC TCGACACTGA CCAGCGCGTG
CTTTACCTGG GTTCATTCTC GAAAGTGCTT TATCCTGGCC TCAAACTGGG CTACCTGGTC
GTACCCAAGA CGCTCGTGCC GCCTTTCAAG CAGGCGCACT ACGACCTGAA CCGGCCGGGC
CAGATGCCGC TGCAAGCGGC ACTGGCCGAA TTCATTGAAA TGGGGTACTT CGCCAGCGCG
CTGCGCCGTG CCCGCCAGGG CTACGCCGAA CGCAGGCAGT GCCTGCTCGC CGCGCTGCAG
CCCTGCCTTG GGCCATACGC TCACATCTCC GGCGCTGAGC AGGGCCTGCA CCTGTGTGTG
CGGCTGCCCC CTACACTCGA CGACAAGGCC CTGGCGCAGC GCCTTGGGGA ACTTGGTTTG
ACCGTGCGCG CCTTGTCTGC GTATTGTCTG CGACGTACCG ACGCCAAAGG TCTGGTCATT
GGTTACGGCT ATGCGACCTT GACTGACATT GCGCATTACG GCCCCCTGGT CGCCAAGGCG
ATTGCTGGCG CACTGGCATG TTTGACACCC AAGCTTGAGT CTCTATAG
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| Protein sequence | MLSEYLLTEI ARLGLQTKLP LHRQLYEALR RAMLDGKLCA GQRLPSSREL TQDLGLSRNT
VVAALNQLAV EGYLVSHIGS GTFVNDSVPK VAPRHRTAHE KQGATLSRRG RALATTFCAT
QLEIQPFTPG IADFSAFPVA LWQRLQNKHW RMTYPDMLDY NFSGGYWPLR RAVADYLRVF
RSVPLDVDQV IITSGTQQSM ELCAQLLADH SDTVWLEDPA YWGAIKAFMA TGLNLHSVPV
DQEGIAPQAE DEAVPPRLIY VTPSHQYPTG AVMSLARRHQ ILSIARRHKA WVLEDDYDSE
FRFSGPPISS LAGLDTDQRV LYLGSFSKVL YPGLKLGYLV VPKTLVPPFK QAHYDLNRPG
QMPLQAALAE FIEMGYFASA LRRARQGYAE RRQCLLAALQ PCLGPYAHIS GAEQGLHLCV
RLPPTLDDKA LAQRLGELGL TVRALSAYCL RRTDAKGLVI GYGYATLTDI AHYGPLVAKA
IAGALACLTP KLESL
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