| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0341 |
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| Symbol | |
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| ID | 3961380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 340563 |
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| End bp | 341504 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915173 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_521626 |
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| Protein GI | 89899155 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.398089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCTT CGTTATTCCC AATCATCGCC ATGGATCTGA AGCAACTGGA ATATTTTGTG
CGCGTGGCCG AACTGGGCAG TTTCACCCGT GCCGCCATTG CGCTGGATGT GGCCCAACCT
GCCTTGAGCC GCCAGGTGCG CCTGCTGGAG GTCGAGCTGC GGCAAAACCT GTTGACCCGC
AATGGCCGCG GTGCGCTGCC CACCGAGGCG GGCAAGCTGC TGCTGGCGCA TGGCCGCGGC
ATCCTGCACC AGGTGGAACG TGCCCGCGAA GAACTCGGCC GGGTGCGTGG CTCGTTGGCG
GGGCGTGTGG CCGTGGGCTT GCCCACCAGC TTGGCCCGGG TGTTGACAGT GCCTTTGATT
CGGGCCTTCC GCATCGAATT GCCGGATGCC ACACTTGCCA TCAGCGAAGG CTTGTCCGTG
CCGATGCAAG AGTCGCTGAT CGCCGGGCGG CTTGACATTG CGGTGCTTTA CAACGCCCAA
CCGACCGCGG AAATAGAAAT CACCCCGCTG CTGGAAGAAG ACCTGCTGCT GGTGCAACGC
CGCCCACCCG GCTTGCCGGA AGACCCGCCG CCCGGCCCCA TCACGCTGCG GGAACTGGGG
CAGCTGCCCC TGGTCATTCC CACCCGACCC AATGCGATCC GCATGCACGT GGAGTCTGAG
TTGGCCAATA TCGGCTGTCG GCTGAACATC GCGCTGGAAA TTGACGGCGT GTCGGCCATC
CTGGATCTGG TGGCGGACGG GGCCGGTTAC GCCGTGTTGT CACGCAACGC GGTGTCCAGC
TCCATCCGTC CTTCGGCATT TTCAGTGCGC ACCATCACCG CCCCGGTACT ACGCACCAAA
GTCAGCATGG CCACCAGTTC ATTACGCCCG ACAACACTGA CCCAGCAAAC CACCCTGAAA
CTACTGCATA AAACTATTTG CAAAATTGTG GGCCCTATTT GA
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| Protein sequence | MDASLFPIIA MDLKQLEYFV RVAELGSFTR AAIALDVAQP ALSRQVRLLE VELRQNLLTR
NGRGALPTEA GKLLLAHGRG ILHQVERARE ELGRVRGSLA GRVAVGLPTS LARVLTVPLI
RAFRIELPDA TLAISEGLSV PMQESLIAGR LDIAVLYNAQ PTAEIEITPL LEEDLLLVQR
RPPGLPEDPP PGPITLRELG QLPLVIPTRP NAIRMHVESE LANIGCRLNI ALEIDGVSAI
LDLVADGAGY AVLSRNAVSS SIRPSAFSVR TITAPVLRTK VSMATSSLRP TTLTQQTTLK
LLHKTICKIV GPI
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