Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0321 |
Symbol | |
ID | 3961282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 319673 |
End bp | 321184 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637915153 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_521606 |
Protein GI | 89899135 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.289675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAATT CCATAGCCGA CAAAGAGACA AGTATGTCAC CCAGCAAACA AGAAATGACG CGATTTTCTG ATCTTCCAAG CTCCCGCGCG GCTGCGGCGC CCGATGCGCC GTGTATCGCC GATGCCAGCG CCGCCCTGTC CAACAGCGAC TTTCATTTGT GCGTCCTGCG CGCGGCTGGC GTTTTCGAGA CCCATGGCAT CAAGGCGGGC GACGTCGTCG CGCTCATGCT GCCGAACCAA GCCGAGTTCG TCGTCGCGAT GTTCGCGGCC TGGCACCTCG GTGCCGCCAT GACGCCTATC AATCCTGCAC TGACGCAGAA GGAAGCGTCT CACCAGATCG TCGACTCCCG CGCCAAGCTC CTCATCAACA GCACTGGTGA GGCGGTGGTC GCAGGCGTCA CCACGTTGCC CGCGACGGCA CAGAAGGATG GCCCCAGGCA TGAAGGCAAA CCGGTGGACG ACCCGTCCGC CCTGGCCTTA CTGATCTACA CCAGCGGCAC CACCGGCCTG CCCAAGGGTG TGATGCTGGA CCACGCCAAC ATCGAAGCCA TGACGGAAAT GGGCCGCGAG GGGCTGCAGA TCACTTCTGC CGACCACTGC CTGCTGATCT TGCCGCTCTT TCATGTCAAC GGCATCGTCG TGAGCGTTCT GACGCCATTG GCCAGCGGTG CGCACGTCAC GATCCGGCGC CGCTTCGACA TTGACACCTT TTTTGCCGAC ATCGAACGCC TGCGGCCCAC GTTTTTCTCA GCCGTTCCGA CCATCTACAC GATGCTCGGG GCTCTGCCGT CCGATGTGCG CCCCGACGTG TCCAGCCTGC GCTACGGCGT GTGCGGCGCT GCGCCCGCCT CAGCGGAATT GCTCACTGGC TTCGAGGCGC GGTATGGCTT CCCACTGGTC GAGGCCTATG GGCTGTCCGA GGGCACCTGT GGGTCTACGC TGAACCCGGT CGACGGCGTG CGCAAAGCAG GGACGGTTGG TTTACCGTTG CCCGGTCAGA AGATTGCGAT TGCGGACGGC AAGGGCGCGC ACCTGCCTCC CGGTTCGACC GGTGAAGTGT TGGTCGCCGG CCCTAATGTC ATGCGTGGCT ACCTTAACCA GCCCGACGCC ACCGCAAAAA CCATCGTCAA TGGCTGGTTG CACACCGGTG ACATCGGCCG CATCGACGAC GACGGTTACC TCTCCATCGT TGGCCGCCTA AAGGAGATGA TCATTCGCGG GGGCGAAAAC ATCTACCCGA AAGAGATCGA AGATGTTTTG GTCGAGCACC CCAGCGTGCT GGAAGCGGCG GTGGTGGGCG CGCCGGACGA GCGGCTTGGC GAAATCGTGG TCGCCTTCGT ATCGCGCCGC CCCGGTGCCA CCGTGACGGT CGATGCGTTG AACGCACACT GCGCCTCGCG CTTGGCCCGC CACAAACTGC CGGCGATCAT TCACATCATC GAATCCCTGC CAAAAAATGC AGTAGGCAAG ATCGCCAAGC CGGTGCTGCG CGAGCAGGTT CGGGGGCAAT GA
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Protein sequence | MPNSIADKET SMSPSKQEMT RFSDLPSSRA AAAPDAPCIA DASAALSNSD FHLCVLRAAG VFETHGIKAG DVVALMLPNQ AEFVVAMFAA WHLGAAMTPI NPALTQKEAS HQIVDSRAKL LINSTGEAVV AGVTTLPATA QKDGPRHEGK PVDDPSALAL LIYTSGTTGL PKGVMLDHAN IEAMTEMGRE GLQITSADHC LLILPLFHVN GIVVSVLTPL ASGAHVTIRR RFDIDTFFAD IERLRPTFFS AVPTIYTMLG ALPSDVRPDV SSLRYGVCGA APASAELLTG FEARYGFPLV EAYGLSEGTC GSTLNPVDGV RKAGTVGLPL PGQKIAIADG KGAHLPPGST GEVLVAGPNV MRGYLNQPDA TAKTIVNGWL HTGDIGRIDD DGYLSIVGRL KEMIIRGGEN IYPKEIEDVL VEHPSVLEAA VVGAPDERLG EIVVAFVSRR PGATVTVDAL NAHCASRLAR HKLPAIIHII ESLPKNAVGK IAKPVLREQV RGQ
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