| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0314 |
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| Symbol | |
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| ID | 3961275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 313865 |
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| End bp | 315076 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637915147 |
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| Product | major facilitator transporter |
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| Protein accession | YP_521600 |
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| Protein GI | 89899129 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.330821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCACA GTGTGCGTCG TCCTGATTTG CTGATCATCG TTCTTGCTTC AGCAGGTATT
CTCATGGTCA CCATGGGTAT CAGACAGTCA TTCGGGCTCT TTGTGAGTCC TGTGAATACC
TCGACGGGTC TGGGTGTTGT CACCATCAGC TTCGCTTTGG CTATCGGCCA ATTCACCTGG
GGGGCTGTTC AACCGGTGGC TGGAGCCATT GCTGATCACT ACGGTCCGCG CCCTGTACTC
ATCGCGGGCC TGGTTATTTT GGCGCTAGGT TGCCTCATCA CCCCCTTTGT TTCAAGTGGA
TTCGGTCTTG CCGCTTCACT TGGTCTATTG GCTTCGGTGG GGTCGGGAAT GGGTAGTTTT
TCCGTGCTGA TTGGTGCGGC AGCTCGGCGT TTACCGGTAG AGTCAAGAGG TGCGGCCTCC
GGGATCATCA ATGCCGGCGG TTCCTTTGGG CAGTTCGTTT TCGCGCCCCT CCTGCAAAAG
CTTATTCAGA GTATCGGCTG GATGGGGGCT ATCGGCTCCA TGGCAATCGT GGCCCTGGCC
GCCATTCCTC TCGTCAGCCG GGTGACAGGC ACACAGCCAG CACTTGACGC TCATGGCGTA
CACAACGGTG GGCTAAAGCG AGCGATTCTG GATGCACTCA AGAACCCCAG TTATCTCCTT
TTGCATGCTG GTTTTTTTAC CTGTGGTTTT CATATTGCCT TCTTGGTGAC GCATTTACCA
GGGGAGGTTG GTCTCTGCGG TCTGCCGCCT AATGTTGCCA GTTGGTCTTT GGCGCTTATT
GGCATCGCCA ATATATTGGG TAGTCTGATT GCAGGCTCAT TCGTGGCAAA GTATCGGAGC
AAATACATCC TGTCAGTGAT GTATGGTTCA AGAACGCTAC TCATCTTGGG GTATCTGATG
ATGCCCAAAG TCGAGTGGAC TTACTACCTG TTCGCCATCG GGCTTGGTCT TACCTGGCTC
GCCACCGTAC CCCCGACCGC CGCCATCGTC GGCAAGCTGT TCGGTACCCG TTACCTTGCG
ACTTTGTTCG GATTGACATT GCTGTCGCAC CAGATTGGAG GATTTCTAGG AGCCTGGCTG
GGCGGTATCT CAATGAGTCA GTTCGGAGAC TTCACTTGGA TGTGGTACGC CGACATGGTC
TTGGCCGCTT TGGCCGCCTT ACTGAATCTG CCCATCCGCG AGGAACGTGT CAAAAGACTC
GTCACCGCAT AG
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| Protein sequence | MFHSVRRPDL LIIVLASAGI LMVTMGIRQS FGLFVSPVNT STGLGVVTIS FALAIGQFTW
GAVQPVAGAI ADHYGPRPVL IAGLVILALG CLITPFVSSG FGLAASLGLL ASVGSGMGSF
SVLIGAAARR LPVESRGAAS GIINAGGSFG QFVFAPLLQK LIQSIGWMGA IGSMAIVALA
AIPLVSRVTG TQPALDAHGV HNGGLKRAIL DALKNPSYLL LHAGFFTCGF HIAFLVTHLP
GEVGLCGLPP NVASWSLALI GIANILGSLI AGSFVAKYRS KYILSVMYGS RTLLILGYLM
MPKVEWTYYL FAIGLGLTWL ATVPPTAAIV GKLFGTRYLA TLFGLTLLSH QIGGFLGAWL
GGISMSQFGD FTWMWYADMV LAALAALLNL PIREERVKRL VTA
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