| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0271 |
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| Symbol | |
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| ID | 3961173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 275287 |
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| End bp | 276051 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637915106 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_521559 |
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| Protein GI | 89899088 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC AAGGACAAGC AGCTCTGGTC ACCGGTGGTG GCTCCGGCTT GGGCGAAGCC
ACCGCCCGCG AACTGGCCCG CCTGGGTGCC AAGGTGGCGA TTCTGGACGT GAACCTGGCC
AACGCCGAAA AGGTGGCCGC CGAAATTGGC GGCGTGGCCT GCCAGTGTGA CGTGACCAGC
CCGGACAGCG TGCAAGCCGC CATCGACACC GCCACCGCCG CCCATGGCCC AGCCCGCATC
CTGATGCAGA TTGCCGGCAT CGGCAGCGCC AAGCGGGTCG TCGGCAAGGA CGGCAACGCC
GCCCCGCTGG AAGACTTTGT GCGCGTGGTC AACGTCAACC TGATCGGCAC CTACAACGTG
GCGCGCCTGT TCGCCGCCGC CTGCGCCAAG CTTGAACCCA TGGAAGACGG CGAGCGCGGT
GCCATGGTGT TCACCGCCTC CGTGGCCGCG TTTGACGGCC AGGTCGGCCA GCAGGCCTAC
AGCGCCTCCA AGGCCGGTGT GGCCGGCATG ACGCTGCCCA TGGCGCGTGA TCTGGCGCAG
CACGGCATTC GCGTCTGCAC CATTGCGCCC GGCCTGTTCG CCACGCCGCT GATGAAGACC
TTGCCTGAAG CCGTGCAGGT GTCGCTGGCA GCCAGCATTC CGTTCCCGCA GCGTCTGGGC
AAGCCCGAGG AGTTTGCGCA GTTGGCCGCA CACATTGTCA GCAACTGTCA CCTCAACGGC
GAGGTGATCC GCCTTGATGG CGCACTGCGC ATGGCTCCGC GTTAA
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| Protein sequence | MNIQGQAALV TGGGSGLGEA TARELARLGA KVAILDVNLA NAEKVAAEIG GVACQCDVTS
PDSVQAAIDT ATAAHGPARI LMQIAGIGSA KRVVGKDGNA APLEDFVRVV NVNLIGTYNV
ARLFAAACAK LEPMEDGERG AMVFTASVAA FDGQVGQQAY SASKAGVAGM TLPMARDLAQ
HGIRVCTIAP GLFATPLMKT LPEAVQVSLA ASIPFPQRLG KPEEFAQLAA HIVSNCHLNG
EVIRLDGALR MAPR
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