| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0214 |
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| Symbol | |
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| ID | 3960120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 211341 |
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| End bp | 212522 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915049 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_521502 |
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| Protein GI | 89899031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.486026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCAT CCCACAAAAC CCTGATCAGC CGTGCTGTTG CCACGCTGGC CCTGTCCGCC
TTGAGCGCCC TCCCGACCCT GGCCCAGGGT CTGCCCAAGC TTAAAGTTGG GCTGATGCTG
CCCTACACCG GCACTTACGC CGCACTCGGC AATGCCATCG AAAACGGCTT TCGCCTGCAC
ATCGCCGAGC AAGGCGGGAA ACTCGGCGGG CGCGAGATCG AGTTTGTCAA GGTGGACGAC
GAGTCCGATC CGTCCAAGGC CACCGACAAC GTGAACAAGC TCATCAAGCG CGACAACGTG
GACGTGCTGA TTGGCTCGGT GCATTCCGGT GTTGCCATGG CCATGGCCAA GGTGGCGAAA
GATACCGGCA CCGTGCTGAT CGTGCCCAAC GCCGGAGCGG ACGCGGTGAC CGGCCCGATG
TGCGCCAGCA ATATCTTTCG CAGCTCGTTC TCGAACTGGC AACCCGGCTA TGCCATGGGT
GAAGTGGTGG CCAAGAAAGG ACACAAGAAG GTCGTGACCA TCACCTGGAA GTACGCAGCC
GGCGATGAGT CGATCCGTGG CTTCAAGGAG TCCTTCGAGA AAGGTGGCGG CAAGGTCGTC
AAGGAGCTGA ACCTGCCCTT TCCCAACGTC GAGTTCCAGG CGCTGCTGAC CGAGATAGCA
GCCGCCAAGC CCGATGCCGT CTACACCTTC TTCGCCGGTG GTGGCGCGGT CAAGTTTGTC
AAGGACTACG CCGCAGCCGG CCTGAAGAAG ACCATTCCAC TGTACGGTGC GGGCTTCCTG
ACCGATGGCA CGCTCGATGC CCAGGGTGCC GATGCGGCCG ACCTGCTGAC CACGCTGCAC
TACGCCGACA GCCTGAACAC GCCGCGCGAC AACGCCTTCC GCCTGTCCTA CGCCAAGGCC
TACAAACTGC AACCTGACGT GTATGCCGTG CAAGGGTATG ACGCAGCGCA AATGCTGGCG
GTTGGCCTGG CCGCCGTGAA GGGAGACATC GGCAAAAAAG CCGAGTTCAC TACCGCGATC
GAAAAAGCCA AGATCGACAG CCCACGTGGC CCCTTCACCC TGTCCAGGTC ACACAACCCG
GTGCAGGACA TCTACCTGCG CCAGGTCGGC GGCAAGGAAA ACAAGCTGGC AAGCATCGCC
AGCAAGGCGC TGGCCGACCC CGGCCGCGGT TGCCGCCTGT AA
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| Protein sequence | MSSSHKTLIS RAVATLALSA LSALPTLAQG LPKLKVGLML PYTGTYAALG NAIENGFRLH
IAEQGGKLGG REIEFVKVDD ESDPSKATDN VNKLIKRDNV DVLIGSVHSG VAMAMAKVAK
DTGTVLIVPN AGADAVTGPM CASNIFRSSF SNWQPGYAMG EVVAKKGHKK VVTITWKYAA
GDESIRGFKE SFEKGGGKVV KELNLPFPNV EFQALLTEIA AAKPDAVYTF FAGGGAVKFV
KDYAAAGLKK TIPLYGAGFL TDGTLDAQGA DAADLLTTLH YADSLNTPRD NAFRLSYAKA
YKLQPDVYAV QGYDAAQMLA VGLAAVKGDI GKKAEFTTAI EKAKIDSPRG PFTLSRSHNP
VQDIYLRQVG GKENKLASIA SKALADPGRG CRL
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