| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0208 |
|---|
| Symbol | |
|---|
| ID | 3960191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 206825 |
|---|
| End bp | 207367 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637915043 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_521497 |
|---|
| Protein GI | 89899026 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3245] Cytochrome c5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA ACAGCCCCGC TACTGTTCAC GATGAGGCGC ATAGCGGCCC CATTAAAAAC
CCCAAGCAAA TGCTGCTTGC CGTCACTTTC TCGTTTGTGG TTCCGATCTT CGCCATCATT
GGTTTGGTTT ACTACGTGAC CATGGGCAAC AAACCCGCCG CCACCGAAGC CAACTCGGAA
CAAGCGGTGG CCGCACGGAT CCAGAAAATT GGCCGCATCG AAATTCGTGA CGCCAACCGG
CCGCTGCGCA CCGGTGAAGA GGTGTTTAAA GCCCAGTGCA CGGCCTGTCA CACCGCTGGC
CTCGTCGGTG CCCCCAAATT TGGCGATGCA GCGGCCTGGG CGCCGCGCAT TCAGACCGGC
TATGACGCAC TGCTGAACTC GGCACTCAAG GGTAAAAATG CCATGGTTGC CCAGGGCGGC
GGTGAATTTC AGGACCTGGA AGTCGGTCGC GCCGTGGTTT ATATGGTGAA CGCCGCCGGC
GGCAAGTTCG CGGAGCCGCA AGCGGCTGCC GCCCCGGCTG AGGCGGCGTC AGCCGCCAAG
TAA
|
|---|
| Protein sequence | MTDNSPATVH DEAHSGPIKN PKQMLLAVTF SFVVPIFAII GLVYYVTMGN KPAATEANSE
QAVAARIQKI GRIEIRDANR PLRTGEEVFK AQCTACHTAG LVGAPKFGDA AAWAPRIQTG
YDALLNSALK GKNAMVAQGG GEFQDLEVGR AVVYMVNAAG GKFAEPQAAA APAEAASAAK
|
|---|
| |