Gene Rfer_0194 details

Gene Information

• Locus tag: Rfer_0194
• ID: 3961348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 192375
• End bp: 193058
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637915029
• Product: OmpW
• Protein accession: YP_521483
• Protein GI: 89899012
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACATC AAATGAAGTT CCTCGCCATT GCCGCCGCTG CCATGCTGGC AGCTGGCAGC 
GTTTGCGCCC AGACCGCCGG TACCTGGATG GTGCGCGCCG GCGCCACCAG GCTGGCGCCG 
GTTGGCCCGA GCGGCTGCAT GACGGCCCCG GATTATGGTG ATGGCAGCGG CTGTACCCGC 
AGCAATGTCA GCGCCAATAC GCAGCTTGCC GGTGGTATCA CCTACATGTA CACCGACAAC 
ATTTCGGTCG ATGTGCCCTT GGCATTGCCT TTCAAACACG ACGTCATCGG TGCTGGTTCG 
ATGGAAGGTG CGGGTAAGCT GGGCGAAGTG AAGGCGCTGC CCATGACTGT GTTCCTGCAA 
TACCGTTTTC TGGAAGCCAA CGCCAAGTTC CGTCCCTATG TTGGCCTGGG GGTGACGTAT 
GCCTACTTCT TCGACGAACA AGGCAGTTAC CACTTGACGC AAACCACCAA TCCCGGGGGT 
CCGCCGACTT CCTTTACGGT CGATGCCAAG TTCATCCTGA CACCACAAAT CGGCGCCACG 
TTGGCTTTGA ATGACAAGTG GTTCATCGAC GTGTTCTACA GCAAGGCCAA GCTCAGCACG 
ACGACACACT TCTCGTCAGG GCAAACCATG CCAGCTGACC TCGACCCGGC CGCCTACGGC 
ATCGCCGTCG GCTACAAGTT CTAA 

 

Protein sequence

MKHQMKFLAI AAAAMLAAGS VCAQTAGTWM VRAGATRLAP VGPSGCMTAP DYGDGSGCTR 
SNVSANTQLA GGITYMYTDN ISVDVPLALP FKHDVIGAGS MEGAGKLGEV KALPMTVFLQ 
YRFLEANAKF RPYVGLGVTY AYFFDEQGSY HLTQTTNPGG PPTSFTVDAK FILTPQIGAT 
LALNDKWFID VFYSKAKLST TTHFSSGQTM PADLDPAAYG IAVGYKF