Gene Rfer_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0141 
SymbolphnK 
ID3960550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp144065 
End bp144949 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID637914978 
Productphosphonate C-P lyase system protein PhnK 
Protein accessionYP_521432 
Protein GI89898961 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4107] ABC-type phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.662097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CGCCGGGCCG TCCCCAAGCA AGCTCGCACC GCAGTGCGCA GCACGAAGGT 
ACGCCAGTGA TCCCGCCGGT GTTGTTGTCG GCGCGCCAGG TCGGCAAGGC CTTTGTGCAC
CAGGGCCAGC CGCGCTGGGC CTGCCGTGGC GTGAGTTTTG ATCTCTACCC CGGCGAGGTG
CTGGCGGTGG TGGGAGAGTC CGGTTCGGGC AAAAGCACGC TGCTGCGCCT GCTGGCGGCG
CGCCTGGCTT GCGACGAAGG ATCGGTGCAT TACGACGTGC GGGCCGAGTC CCCCAACGAA
TCCGGGAGCG AGTCCACGGG CCTGGTGGAT CTGGCCGAAC TATCGGAAGC ACGCCTGCGC
TGGCTGGCCC GCACCGATTG GGGTTTTGTC GAGCAGCATG CGCGCGACGG CCTGCGTATG
AACGTCTCGG GTGGCGCCAA TGTGGGAGAG CGCCTGATGG CCCTGGGGGC CAGGCACTAC
GGCCATCTGC GCAGCGAGGC GAGCTCGTGG ATGCAACGCG TGGAACTCGA CGCCGGCCGC
ATGGACGACC TGCCCGCCAC CTACTCGGGC GGCATGCAGC AGCGCCTGCA GATTGCCCGC
AACCTGGTGA CGCATCCGCG CCTGGTGTTC ATGGACGAGC CCACCACGGG TCTGGACGTC
TCCGTGCAAG CCCGCCTGCT GGACCTGCTG CGTGAGCTGG TGGACGAGTT GCAGCTGGCC
GCCGTGGTGG TCACGCACGA CCTGGCGGTG GCGCGCTTGC TGGCGCAGCG CATGCTGGTC
ATGAAAGACG GTTGCGTGGT GGAACAAGGC CTGACCGATC GCGTGCTGGA CGACCCCCAG
CATCCCTATA CCCAATTGCT TGTTTCCTCG GTACTGACGC CATGA
 
Protein sequence
MSAAPGRPQA SSHRSAQHEG TPVIPPVLLS ARQVGKAFVH QGQPRWACRG VSFDLYPGEV 
LAVVGESGSG KSTLLRLLAA RLACDEGSVH YDVRAESPNE SGSESTGLVD LAELSEARLR
WLARTDWGFV EQHARDGLRM NVSGGANVGE RLMALGARHY GHLRSEASSW MQRVELDAGR
MDDLPATYSG GMQQRLQIAR NLVTHPRLVF MDEPTTGLDV SVQARLLDLL RELVDELQLA
AVVVTHDLAV ARLLAQRMLV MKDGCVVEQG LTDRVLDDPQ HPYTQLLVSS VLTP