Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0141 |
Symbol | phnK |
ID | 3960550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 144065 |
End bp | 144949 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637914978 |
Product | phosphonate C-P lyase system protein PhnK |
Protein accession | YP_521432 |
Protein GI | 89898961 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.662097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CGCCGGGCCG TCCCCAAGCA AGCTCGCACC GCAGTGCGCA GCACGAAGGT ACGCCAGTGA TCCCGCCGGT GTTGTTGTCG GCGCGCCAGG TCGGCAAGGC CTTTGTGCAC CAGGGCCAGC CGCGCTGGGC CTGCCGTGGC GTGAGTTTTG ATCTCTACCC CGGCGAGGTG CTGGCGGTGG TGGGAGAGTC CGGTTCGGGC AAAAGCACGC TGCTGCGCCT GCTGGCGGCG CGCCTGGCTT GCGACGAAGG ATCGGTGCAT TACGACGTGC GGGCCGAGTC CCCCAACGAA TCCGGGAGCG AGTCCACGGG CCTGGTGGAT CTGGCCGAAC TATCGGAAGC ACGCCTGCGC TGGCTGGCCC GCACCGATTG GGGTTTTGTC GAGCAGCATG CGCGCGACGG CCTGCGTATG AACGTCTCGG GTGGCGCCAA TGTGGGAGAG CGCCTGATGG CCCTGGGGGC CAGGCACTAC GGCCATCTGC GCAGCGAGGC GAGCTCGTGG ATGCAACGCG TGGAACTCGA CGCCGGCCGC ATGGACGACC TGCCCGCCAC CTACTCGGGC GGCATGCAGC AGCGCCTGCA GATTGCCCGC AACCTGGTGA CGCATCCGCG CCTGGTGTTC ATGGACGAGC CCACCACGGG TCTGGACGTC TCCGTGCAAG CCCGCCTGCT GGACCTGCTG CGTGAGCTGG TGGACGAGTT GCAGCTGGCC GCCGTGGTGG TCACGCACGA CCTGGCGGTG GCGCGCTTGC TGGCGCAGCG CATGCTGGTC ATGAAAGACG GTTGCGTGGT GGAACAAGGC CTGACCGATC GCGTGCTGGA CGACCCCCAG CATCCCTATA CCCAATTGCT TGTTTCCTCG GTACTGACGC CATGA
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Protein sequence | MSAAPGRPQA SSHRSAQHEG TPVIPPVLLS ARQVGKAFVH QGQPRWACRG VSFDLYPGEV LAVVGESGSG KSTLLRLLAA RLACDEGSVH YDVRAESPNE SGSESTGLVD LAELSEARLR WLARTDWGFV EQHARDGLRM NVSGGANVGE RLMALGARHY GHLRSEASSW MQRVELDAGR MDDLPATYSG GMQQRLQIAR NLVTHPRLVF MDEPTTGLDV SVQARLLDLL RELVDELQLA AVVVTHDLAV ARLLAQRMLV MKDGCVVEQG LTDRVLDDPQ HPYTQLLVSS VLTP
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