| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0139 |
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| Symbol | |
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| ID | 3960548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 142208 |
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| End bp | 143350 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637914976 |
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| Product | phosphonate metabolism PhnM |
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| Protein accession | YP_521430 |
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| Protein GI | 89898959 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.119407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC GCATTTTCCG CAACGCCCGC ATCGTCACCC CCGACAACGA ATTTACCGGT
TGCTTGGTGG TTGAAGACGG CATCATCCGC AGCATGGACA GCGGCAACAC GTCCGTACCC
GGCGCCCAAG ACTGGGCTGG CGACTGGCTG CTGCCCGGCC TGGTGGAGGT GCACACCGAC
AACCTGGAGA AGCATCTGTC ACCCCGCCCC GGCGTGTTGT GGAACGCCCA CTCGGCCATG
ACGGTGCACG ATGCACAGTG CGCGGCGGCG GGCATCACCA CCGTGCTGGA CTCGGTGGTG
ATCGGCGACC TGGACGACGA CGGCACGCGC AGCCAGACGC AGCACACGTC CATCGCCGCG
CTGCACCAAT GCCATGAAGA AGGCCTGATG CGGGTCGAGC ACCTGCTGCA CCTGCGCTGC
GAACTCTCCG CGCCCGACAT GCTGGAGGTG TTTCACGAAT ACGCCGACGA CTCGCTGCTG
GCACTGGTCA GCATGATGGA CCACACGCCG GGCCAGCGCC AGTGGCGCGA CCTGAAAAGC
TACCGCCGCT ACACCGAGCG CAATGGCAGC TACAACGACG CCGAGTTCGC GGCCATGATT
GCGCAGCGCA AGGCGGACCA GCAGGCCTTC TCGCTGCCAC ACCGGGTGGA AATTGTGCGT
GAGTGCCAGG CCCGCGGCCT GCCTTTGGCC AGCCACGACG ACACCTTGCT CAGCGACATT
GCCCAAGCCG TTGCAGAAGG CGTGGCGATG TCGGAGTTCC CGACCACGGT GGCGGCGGCG
CAGGCGGCGC GTGCGGCGGG CATGGCCATC ATCATGGGCG GGCCCAATAT GGTCAAGGGC
GGCTCGCACT CGGGCAACGT GTCGGCCGCC GAGCTGGCGC AGCTCGATTT GCTGGACATT
TTTTCGTCCG ACTACGTGCC CAGCAGCCTG CTGCTGGGCA CTTTCATGCT CGGGCAGCTG
GAGGGCTGGA CGCTGCCCAA GGCGGTGCGC ACCGTCACGG TCAATCCGGC GCGGGCGATT
CGCCTGCAAG ACCGTGGCGA CGTGGCGCCG GGCCAGCGTG CCGACCTGCT GCGCGTGCGC
ATGAACCGCG TCGGCATGCC TGTCGTGCTG GAAGCCTGGC TGGCTGGCAA ACGGGCTTTC
TGA
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| Protein sequence | MKQRIFRNAR IVTPDNEFTG CLVVEDGIIR SMDSGNTSVP GAQDWAGDWL LPGLVEVHTD
NLEKHLSPRP GVLWNAHSAM TVHDAQCAAA GITTVLDSVV IGDLDDDGTR SQTQHTSIAA
LHQCHEEGLM RVEHLLHLRC ELSAPDMLEV FHEYADDSLL ALVSMMDHTP GQRQWRDLKS
YRRYTERNGS YNDAEFAAMI AQRKADQQAF SLPHRVEIVR ECQARGLPLA SHDDTLLSDI
AQAVAEGVAM SEFPTTVAAA QAARAAGMAI IMGGPNMVKG GSHSGNVSAA ELAQLDLLDI
FSSDYVPSSL LLGTFMLGQL EGWTLPKAVR TVTVNPARAI RLQDRGDVAP GQRADLLRVR
MNRVGMPVVL EAWLAGKRAF
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