| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0094 |
|---|
| Symbol | |
|---|
| ID | 3960095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 97461 |
|---|
| End bp | 97853 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637914932 |
|---|
| Product | guanine-specific ribonuclease N1 and T1 |
|---|
| Protein accession | YP_521386 |
|---|
| Protein GI | 89898915 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4290] Guanyl-specific ribonuclease Sa |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.162005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTC TGAAAAGCTC TAAGTTAGTA CTTACCAGCT TTTTTCTTGC TGCGATTTTC
GCCTGTGCAG GGGTGCTGGC CAAAGGGCCT GCCCCGGCAG ACGCTGCCAC TGCCATCGCG
GTGACCGCTT TACCCAAGCA AGGCGTGCAG ACCTACGACC TGATTCATCA AGGCGGTCCG
TTTGCGCATG AAAAAGATGG TGTGGTGTTT GGCAACCGTG AGCGTTTGCT GCCACTCCAA
AAGCGTGGTT ACTACCGTGA ATATACCGTC GCAACACCGA ATTTACATGC CCGGGGAGCC
CGGCGCATTG TGTGCGGAGG GGCTGCCAGA GCGCCTGACG CTTGTTATTA CACCGCCGAT
CACTATGCGA GCTTCCGCCG GATCGTGCCG TGA
|
|---|
| Protein sequence | MLRLKSSKLV LTSFFLAAIF ACAGVLAKGP APADAATAIA VTALPKQGVQ TYDLIHQGGP
FAHEKDGVVF GNRERLLPLQ KRGYYREYTV ATPNLHARGA RRIVCGGAAR APDACYYTAD
HYASFRRIVP
|
|---|
| |