Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0093 |
Symbol | |
ID | 3960094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 94994 |
End bp | 97303 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637914931 |
Product | malic enzyme |
Protein accession | YP_521385 |
Protein GI | 89898914 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.351367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCATA CAACGGCCAC CGCCGCAGAC AAACGCGCTG AATTGCGCCG CGCCACACTC GAGTACCACG AATTTCCCAC CCCCGGCAAA ATTTCCATTG CGCCGACCAA GCAGTTGATC AACCAGCATG ATCTGGGGCT GGCCTACACG CCGGGCGTGG CCATTCCGTG CGAGGAAATC GTCAAAGACC CGAATAACGC CTACAAGTAC ACCAGCCGGG GCAATCTGGT GGCGGTCGTC ACCAACGGCA CCGCCGTGCT CGGACTGGGC GACATTGGCC CATTGGCGGG TAAACCGGTG ATGGAAGGCA AGGCCGTGCT GTTCAAGAAG TTCGCCGGTA TTGATGTGTT CGACATCGAA ATCAACGAAA AGCACGATCT TGACAAGCTG GTGGACATCA TCGCTTCGCT GGAGCCGACC TTTGGCGGCA TCAACCTGGA AGACATCAAG GCACCCGACT GCTTTTATGT CGAGCGCAAG TTGCGCGAAC GCATGAAGAT TCCGGTCTTT CATGATGACC AGCACGGTAC CGCCATCACG GTCGGTGCGG CCATTCTCAA CGGCCTGAAA GTGGCCGGCA AGGACCCGAA AGACGTGAAA CTGGTGACCT CCGGCGCCGG TGCCGCAGCG CTGGCTTGCG TCGGGCTGCT GGTCAAACTG GGCATTCCCC GTGAAAACGT GTGGGTGACC GATCTGGCCG GTGTCGTGTA CGAGGGCCGC ACCGAGCTGA TGGACCCGGA CAAGATCATT TACAGCCAGA AGACATCGGC GCGCACCCTG GGTGAAGTCA TTGAAGGTGC TGACGTGTTT CTGGGCTTGT CAGCGGGCGG TGTGCTCAAG GGCGAAATGG TCAAAAGGAT GGCGCCCAGG CCGATCATTT TTGCGCTCGC CAACCCGACG CCCGAGATCA CGCCCGAAGA AGTGAAGGCC GTGCGCAGCG ACGCCATCAT CGGCACCGGC CGCTCGGATT ACCCGAACCA GATCAACAAC ATCTTGTGTT TCCCCTACAT TTTCAGGGGC GCACTGGACG CGGGCGCCTC CACCATCACG GTGGAGATGG AAATGGCGGC GGTGCATGCG ATTGCCGACC TGGCGCAGGC CGAGCAAAGC GAAGTGGTTG CTGCCGCCTA TGTTGGCGAG CCGCTGGCCT TTGGGCCGGA GTACCTGATC CCCAAGCCCT TTGATCCGCG TTTGATGATC AAAGTGGCGC CAGCGGTGGC CCAGGCCGCG TTTGACAGCG GCGTGGCCTT GCGCCCGATT GCGGACATGG ATGCCTACCG CGAGAAGTTG CAAAGCTTCG TCTACGCCTC GGGCACCGTG ATGAAACCGA TTTTCGCCGC CGCGAAAAGT GCGCTTAAAA AGCGGATCGC CTATGCCGAG GGTGAAGATG AACGTGTGCT GCGCGCGGCC CAGATTGTGG TGGACGAAGG CTTGGCCCTG CCCACGCTGA TTGGCCGTCC GCTGGTGATT GCCGAGCGCA TCAATAAGTT TGGCTTACGC CTGGAAGAGG GGCAGGACTA CAGCGTCGTC AATGTGGAGC AGGATCATCG CTACCGCGAT TTCTGGCAAA CCTACCACCG CATGACCGAG CGCAAGGGCA TGACGGCCCA GGTTGCCAAG ATCGAGATGC GCCGACGCCT GACCCTGATT GGCAGTATGT TGTTACAAAA GGGTGATGTG GATGGGCTGA TTTGCGGCAC CTGGGGCACC ACGGCGATGC ACCTGCAATA TCTGGATCAG GTGATTGGAA AACGCACTGG CGTCAACACC TATGCCTGCA TGAATTGCCT GATGTTGCCC GAGCGCCAGC TATTTATAGT GGACACCCAC GTCAACTACG ATCCCACTGC CGAGCAACTG GCCGAGATCA CAATTCTGGC GGCAGAGGAA ATGGTGCGCT TCGGCATTCG GCCCAAAGCC GCCTTGCTGT CGCACTCCAA CTTTGGCAGC AGCAACCAAC CCAGCGCCGT GAAGATGCGC GAGGCTTTGG ACTTGCTGCG GGTCAAGGCG CCGTGGCTGG AGGTGGACGG CGAAATGCAT GGCGACGTGG CGCTCGATGG CGCAGCCCGC GCAGCCCTCA TGCCCAACAG CACACTGGCG GGGGACGCCA ATCTTCTGGT GTTACCCAAT ATCGATGCCG CTAATATTGC CTACAACCTG CTCAAGACAG CAGCCGGTGG CAATATCGCC GTTGGTCCGG TGCTGCTGGG CGCGGCCAAA CCGGTGCATA TCTTGACCGC CAGTGCCACG GTGCGTCGAA TTGTGAATAT GACGGCCCTC ACTGTGGCCG ACGCAAACGC CAGCCGCTGA
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Protein sequence | MPHTTATAAD KRAELRRATL EYHEFPTPGK ISIAPTKQLI NQHDLGLAYT PGVAIPCEEI VKDPNNAYKY TSRGNLVAVV TNGTAVLGLG DIGPLAGKPV MEGKAVLFKK FAGIDVFDIE INEKHDLDKL VDIIASLEPT FGGINLEDIK APDCFYVERK LRERMKIPVF HDDQHGTAIT VGAAILNGLK VAGKDPKDVK LVTSGAGAAA LACVGLLVKL GIPRENVWVT DLAGVVYEGR TELMDPDKII YSQKTSARTL GEVIEGADVF LGLSAGGVLK GEMVKRMAPR PIIFALANPT PEITPEEVKA VRSDAIIGTG RSDYPNQINN ILCFPYIFRG ALDAGASTIT VEMEMAAVHA IADLAQAEQS EVVAAAYVGE PLAFGPEYLI PKPFDPRLMI KVAPAVAQAA FDSGVALRPI ADMDAYREKL QSFVYASGTV MKPIFAAAKS ALKKRIAYAE GEDERVLRAA QIVVDEGLAL PTLIGRPLVI AERINKFGLR LEEGQDYSVV NVEQDHRYRD FWQTYHRMTE RKGMTAQVAK IEMRRRLTLI GSMLLQKGDV DGLICGTWGT TAMHLQYLDQ VIGKRTGVNT YACMNCLMLP ERQLFIVDTH VNYDPTAEQL AEITILAAEE MVRFGIRPKA ALLSHSNFGS SNQPSAVKMR EALDLLRVKA PWLEVDGEMH GDVALDGAAR AALMPNSTLA GDANLLVLPN IDAANIAYNL LKTAAGGNIA VGPVLLGAAK PVHILTASAT VRRIVNMTAL TVADANASR
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