Gene Rfer_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0087 
Symbol 
ID3960088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp88135 
End bp88647 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content61% 
IMG OID637914925 
Productthiol-disulfide isomerase-like protein 
Protein accessionYP_521379 
Protein GI89898908 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.653321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TTTTCTCGCT GATATTGTTG TGCCTGGTGG CGACAACCAA CCTGGCTGCT 
GCAAAGACTC CCGGTGAAGT GGAAGTCGGT AGCGTTCTGC GCGAGGCGAC GATGCTGGGG
CTGTCCGGAC CGTCGCGTCA GCTGTCGCAG TACCGCGGCA AGCCGCTGAT CATCAATGTG
TGGGCCAGTT GGTGCGGCCC GTGCCAACAG GAAATGGGCT CACTGGAGCG CCTGGCCCGC
AGCAAGACCG GGCAGCAGGT GACGCTGATC GGTATTTCGA CCGACGACTA TCCGGAGGCG
GCACGCGCCT TTTTGAAACG CTACCCAACC AGCTTCAGCC ACTACATTGA CCAGCAGTTG
TTGCTGGAAA ACATGTTGGG AGCGGCGCAA TTGCCGCTCA CCCTGCTGGT TGATGCGCAG
GGCCGTGTGC TGGCCAAACA CGTCGGCGCC CAGCAATGGG ACAGCCCCCA GGCGCTGCAA
TTCATCGGCA AGACCTTGCG CCTCAAGCCG TAA
 
Protein sequence
MKTVFSLILL CLVATTNLAA AKTPGEVEVG SVLREATMLG LSGPSRQLSQ YRGKPLIINV 
WASWCGPCQQ EMGSLERLAR SKTGQQVTLI GISTDDYPEA ARAFLKRYPT SFSHYIDQQL
LLENMLGAAQ LPLTLLVDAQ GRVLAKHVGA QQWDSPQALQ FIGKTLRLKP