| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0069 |
|---|
| Symbol | |
|---|
| ID | 3962281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 70953 |
|---|
| End bp | 72239 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637914908 |
|---|
| Product | uracil-xanthine permease |
|---|
| Protein accession | YP_521362 |
|---|
| Protein GI | 89898891 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAT TCAACTGGAC CGTCAAAAGC GCCAGCGTTT TGCAGCAGGG CGGCGTCATT
GCCCCCGATG AGCGGCTGCC GTGGCCGCAA ACCGCCGTCA TGGGCATGCA ACACGTGATC
GCCATGTTTG GCGCCACCGT GCTGGCCCCG ATCCTGATGG GCTTTGACCC CAATCTGGCG
ATTTTGATGA GCGGCATCGG CACGCTGATT TTCTTTGTTG TCACCGGCGG CAAAGTGCCC
AGTTACCTGG GCTCCAGTTT TGCCTTTATC GGCGTGGTCA TTGCCGCCAC CGGCTATGCG
GGCAAAGGAC TGAATCCGAA TATCGGCGTG GCGCTGGGCG GCATCATTGC CTGCGGCGCC
GCCTACACGG CCATCGGCCT GCTGGTGCAG GTGGTGGGCA CGAACTGGAT TGAAAAGCTG
ATGCCGCCGG TGGTCACCGG CGCCGTGGTG GCCGTCATCG GGCTGAACCT GGCCAGCGTG
CCGATCAAGA ACATGGCGGC CAGCAACTTT GACAGCTGGA TGCAGGCCGT CACCTTTGTC
TGCGTGGCAC TGGTGGCCGT GTTCACGCGC GGCATGGTGC AGCGTTTGCT GATTCTGGTC
GGCCTGATCG TGGCCACCGC GGTGTACGCC GTGTTGACCA ACGGGCTGGG CTTGGGCAAG
GCGCTCGATG TGTCGACCCT GCTGAACGCG GCCTGGATCG GCGCCCCCGG CTTTGCCGCC
CCCGTGTTCG AGCCCAAGGC GATGTTGATG ATCGTCCCGG TGGCCATTAT TCTGGTGGCC
GAGAACCTGG GCCACCTCAA GGCCGTGTCC GCCATGACCG GCAAAAACAT GGACCCTTAC
ATGGGCCGCG CCTTCATCGG CGACGGCATC GCCACCATGG TCAGTGCCAG CGCGGGCGGC
ACCGGCGTGA CCACCTATGC CGAAAACATC GGCGTCATGG CCGCCACCAA AATCTACTCC
ACCGCGCTGT TTCTGGTGGC GGCTCTGCTG GCGGTGGTGC TGGGCTTTAG CCCCAAGTTC
GGTGCGATCA TCGCGGCCAT TCCACTGCCC GTGATGGGCG GCGTGAGTAT TGTGGTGTTT
GGCCTGATTG CCGTGGCCGG CGCCCGTATC TGGGTGCAAA ACAAGGTGGA CTTTGCCGAC
AACAAAAACC TGCTGGTCGC TGCGATCACG CTGATTCTGG GCACCGGCGA CTTCACGCTC
AAGTTTGGCG GTTTTGCCCT CGGTGGCATC GGCACCGCCA CCTTTGGCGC CATCTTTCTG
TACGCGCTGT TGAATCGCAA GCGCTAA
|
|---|
| Protein sequence | MPLFNWTVKS ASVLQQGGVI APDERLPWPQ TAVMGMQHVI AMFGATVLAP ILMGFDPNLA
ILMSGIGTLI FFVVTGGKVP SYLGSSFAFI GVVIAATGYA GKGLNPNIGV ALGGIIACGA
AYTAIGLLVQ VVGTNWIEKL MPPVVTGAVV AVIGLNLASV PIKNMAASNF DSWMQAVTFV
CVALVAVFTR GMVQRLLILV GLIVATAVYA VLTNGLGLGK ALDVSTLLNA AWIGAPGFAA
PVFEPKAMLM IVPVAIILVA ENLGHLKAVS AMTGKNMDPY MGRAFIGDGI ATMVSASAGG
TGVTTYAENI GVMAATKIYS TALFLVAALL AVVLGFSPKF GAIIAAIPLP VMGGVSIVVF
GLIAVAGARI WVQNKVDFAD NKNLLVAAIT LILGTGDFTL KFGGFALGGI GTATFGAIFL
YALLNRKR
|
|---|
| |