Gene Rfer_0064 details

Gene Information

• Locus tag: Rfer_0064
• ID: 3962276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 66445
• End bp: 68331
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637914903
• Product: ferrous iron transport protein B
• Protein accession: YP_521357
• Protein GI: 89898886
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0370] Fe2+ transport system protein B
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00437] ferrous iron transporter FeoB

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.956131
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAAT CTCTTGGCGT CGAGCCGACA CTCCCGATCC GCTGCATTGC GCTGGTGGGC 
AACCCCAATT GCGGCAAAAC GGCGCTCTTC AACCTGCTCA CCGGGGCGCG CCAAAAGGTG 
GCCAATTACG CGGGTGTCAC GGTCGAGCGC AAGGTCGGTC TGGTCCATTT GCACAACGGC 
CAAACGGTGT CGGTGGTGGA TTTGCCGGGG GCCTACAGCC TGACCGCCGC CACGCCGGAC 
GAGCAGGTGA CGCTGGAGGT GATCGAGGGC CGCCGCGCTG GCGAAGATAC GCCCGATGCG 
ATTGTGGCCG TGGTGGATGC CACCAACCTG CGCATGAACT TGCGCCTGGT GCTCGAGCTC 
AAGCGGCTGG GGCGGCCGCT GCTGGTGGCC GTCAACATGG CGGATGTGGC GCGCGCCCAA 
GGGCTCAAGA TTGACCTGGC ACGTCTGGCG ATCGAGTTGG GGCTGCCGGT GGTGGAAACC 
GTGGCCATCA AACACAACGG CCACGCCCAG CTGCTGGCCC AACTGGAACA ACACCTGGCG 
CAGCCCTGGC CCAGCGCGCC CGCCAGCACG GCCTCCGCCA GTTCGGCCGA CTTGCAGCGC 
GAAGTGCGCC GCATCCTGGC CCTGGTGGCG CCGCTTGCCC CGACGCTGGG GCGGTTCCAG 
TACCGGCTCG ATGCCGTCGT CATGCACCCG GTGTGGGGGT TGGTGGTGCT GGCGGCGGTG 
TTGTTCCTGA TTTTTCAGGC TGTTTTTTCC TGGGCCAATT GGCCGATGGA CGCGATCAAG 
GGCGCAATGG CCGCCGTGGG CGACTGGATT CTGGCGCATA TGGCGAGCGG ACCCTTGCGC 
AGCCTGCTGG TGGACGGTGT GGTGGCCGGC GTCGGCGGTG TGCTGGTGTT CATGCCGCAG 
ATCCTGATTC TGTTCTTCTT CATCCTGCTG CTCGAGGACT CGGGCTACCT GCCGCGCGCG 
GCCTTCCTGC TCGACAACCT GATGGGCAAA GTGGGCTTGT CCGGGCGCGC CTTCATTCCG 
CTCTTGTCCA GCTTTGCCTG TGCCATTCCC GGCATCATGG CCACGCGCAC CATTGCCAAC 
TGGAAAGACC GCCTGGCCAC CATCATGGTG GCGCCACTGA TGACCTGCTC GGCCCGCTTG 
CCGGTCTATG CCTTGCTGAT TGGCGCTTTT GTGCCGGAGC GCCGCCTCGG CGGGCTCAGT 
TTACGCGGCC TGACCTTGTT TGGCCTGTAC GTGGCCGGCG TCGTCTCGGC CATGGGCGTG 
GCCTGGGTCT TCAAGCGGGT CTGGATGAAA GACGGCTACC AGCCGCTGAT GCTGGAATTG 
CCGCCGTACC GCCGGCCCAG CCTGCGCAAT CTGGCGCAGG GCCTGTGGGA GCGCGCCCAC 
ATTTTCCTGC GCCGGGTCGG CGGCATCATC TTTGCGCTGA TGGTGGTGCT GTGGTTTCTG 
TCCACCTATC CGGCACCACC AGCCGGCTGG GATGCAGCCC AGGGCCCGGC CATCCAGTAC 
AGCTTTGCCG GCATGATGGG CCATGCGCTG CAGTGGATCT TCGCGCCGAT TGGCTTCAAT 
TGGCAAATCT CGATTGCGCT GGTGCCCGGC ATGGCCGCGC GTGAAGTGGT GGTGGGCGCC 
TTGGGGACCG TGTATGCCCT GTCGGGCGTC GACGCCTCGG TGGCCGATGC TTTGTCGCCG 
GTCATTGCGC AGGGCTGGTC CCTGGCCACC GCCTACGCGC TGCTGGCTTG GTTTGTGTTT 
GCGCCGCAGT GCCTGTCCAC GCTGGCGGTG GTGCGGCGTG AGACCAACTC CTGGCGTTAT 
CCCTTGTTCA TGGCTGCGTA CCTGTTTGTG CTGGCCTATG CGGCGGCGTT TGCGACTTAT 
CGCATCACTT TGTGGTTGGG GGGCTAG 

 

Protein sequence

MSQSLGVEPT LPIRCIALVG NPNCGKTALF NLLTGARQKV ANYAGVTVER KVGLVHLHNG 
QTVSVVDLPG AYSLTAATPD EQVTLEVIEG RRAGEDTPDA IVAVVDATNL RMNLRLVLEL 
KRLGRPLLVA VNMADVARAQ GLKIDLARLA IELGLPVVET VAIKHNGHAQ LLAQLEQHLA 
QPWPSAPAST ASASSADLQR EVRRILALVA PLAPTLGRFQ YRLDAVVMHP VWGLVVLAAV 
LFLIFQAVFS WANWPMDAIK GAMAAVGDWI LAHMASGPLR SLLVDGVVAG VGGVLVFMPQ 
ILILFFFILL LEDSGYLPRA AFLLDNLMGK VGLSGRAFIP LLSSFACAIP GIMATRTIAN 
WKDRLATIMV APLMTCSARL PVYALLIGAF VPERRLGGLS LRGLTLFGLY VAGVVSAMGV 
AWVFKRVWMK DGYQPLMLEL PPYRRPSLRN LAQGLWERAH IFLRRVGGII FALMVVLWFL 
STYPAPPAGW DAAQGPAIQY SFAGMMGHAL QWIFAPIGFN WQISIALVPG MAAREVVVGA 
LGTVYALSGV DASVADALSP VIAQGWSLAT AYALLAWFVF APQCLSTLAV VRRETNSWRY 
PLFMAAYLFV LAYAAAFATY RITLWLGG