Gene Rfer_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0061 
Symbol 
ID3962273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp63721 
End bp64143 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content66% 
IMG OID637914900 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_521354 
Protein GI89898883 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.518307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATCT GGAAACGACC GATCTCGGTG GCTGAACTCA CCGCGATCAG CGTCAACACG 
GCGGTTGACC ACCTGGGAAT GGAATTTCTG GAGGTGGGTG AGGACTTCAT CCGGGCGCGC 
GTGCCGGTGG ATCACCGCAC CCAGCAGCCC TACGGTTTGC TGCACGGCGG CGTGAGCGTG 
GTGCTGGCCG AAACCCTGGG GTCATGTGGC GCCGCCTACG CCAGCCCGGC CGGGCAACTC 
GCCGTCGGGC TGGACATCAA CGCCAACCAC CTCAAGGGTG TCACCAGCGG CTGGGTCACC 
GGCACCGCCC GCCCGGTGCA CATCGGCCGC ACCACCCAGG TCTGGCAGAT CGACCTGCAA 
AACGACGCCG GTGAGCTGAC CTGCGTGTCG CGCATCACGA TGGCGGTGCT GCCGCCGCGT 
TAA
 
Protein sequence
MLIWKRPISV AELTAISVNT AVDHLGMEFL EVGEDFIRAR VPVDHRTQQP YGLLHGGVSV 
VLAETLGSCG AAYASPAGQL AVGLDINANH LKGVTSGWVT GTARPVHIGR TTQVWQIDLQ 
NDAGELTCVS RITMAVLPPR