Gene Rfer_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0060 
Symbol 
ID3962272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp62970 
End bp63674 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID637914899 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_521353 
Protein GI89898882 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.237094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCAG AACCTTTTGA CATACAGCGT CTGTTGTCGG CGCTGCCGCT CTTCAGTGAT 
CTGTCCCAGT TGGAGCGAGA ACGTATCGCC CGAGGATGCC GCTTGGTGCG TCTGGCCCGT
GGCGAGATGT TTTTTCGGGT CGGCGAAGCG TGTGAGGCGT TCCACGTCGT GGTGTCCGGG
CAGATCAAGC TTTACGTGTC ATCACCTGCC GGCCAGGAGA AGGTGATCGA AATCATCGGC
CCGGGCCGAA GCTTTGCGGA GGCCCTGGTG TTTCTCGGGC AGCCTCACAT CGTGAATGCG
CAGTCACTGA CGGACACCTT GCTGGTCAGT GTTGCCAAGG CCGCCGTGCT GGCTGAAGTG
GAGCGGGACC CGCGCTTCTC GCTGCACATG CTGGCTGGCA TTTCCCGTCG CCTTCACAGC
TTGATTCATG ACGTCGAGGG CTATGCCTTG CAAAGTGGCA TGCAAAGACT GATTGGCTAC
TTGCTGCGCG ATGTGGAGGC GGCAGTTGGC CATGGTAGTG GCAACGTCAG CGTCAGCGTT
CATTTGCCCG CCAGCAAGGC AACAATTGCC TCCCGCCTGT CACTGACGCC CGAATATTTT
TCTCGTGTAC TGCACGAGCT CGAAACCCAA GGGCTGATTC AGATCGACAA GCGCGAGATC
CGGATTCTGG ACGTGCACCG ACTCGCCAAT TTCGAGTCAC ATTGA
 
Protein sequence
MNPEPFDIQR LLSALPLFSD LSQLERERIA RGCRLVRLAR GEMFFRVGEA CEAFHVVVSG 
QIKLYVSSPA GQEKVIEIIG PGRSFAEALV FLGQPHIVNA QSLTDTLLVS VAKAAVLAEV
ERDPRFSLHM LAGISRRLHS LIHDVEGYAL QSGMQRLIGY LLRDVEAAVG HGSGNVSVSV
HLPASKATIA SRLSLTPEYF SRVLHELETQ GLIQIDKREI RILDVHRLAN FESH