Gene Rfer_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0048 
Symbol 
ID3960303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp50035 
End bp51486 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content60% 
IMG OID637914887 
Productaldehyde dehydrogenase 
Protein accessionYP_521341 
Protein GI89898870 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA ATCCCTTGTA CCGCGCCGCG CCGCCCACCG ATCTCAACCC ACTCGACAAC 
GGACTTGAAG CCACGCTCAA GCTCCAGCGT GCTGCCTACT TTGCGCATCC CTACCCCAGC
TTTTCAGAGC GCAAAGCTGA CCTGCTCCAA CTGAAAGCCC TCATCCGTGA CAACCGCGAC
GCCATCGTGG CGGCCATCAG CGCGGACTAT GGCAACCGCT CGCGCCATGA AACCCTTTTC
GCCGAGATTT TCAGTGTGAT GGACGGGGTG GATCACACCC TCAAACACCT GAAACAGTGG
ATGAAACCGC AGCGCCGGGG CGTCGACTGG AAGAATTTCT TTGGCGCCAG CAACCGCGTC
ATACCACAAC CCCTGGGCAT TGTGGGTGCC ATCGTGCCCT GGAATTTCCC GATCAATCTC
AGCTTCAGCG GCCTGATTGC CACCTTCGCC GCCGGCAACC GCTCCATGGT GAAAATGTCG
GAGAATTCCC GCCACTTGGC AAAACTGCTG ATTGAAAAAT GCCCGGCCTA TTTCCCCCGG
GAAAAGCTCG CCTTCTTCGA CGAAACCGGC GGCGTCGGCA TCGAGTTTTC CAAGCTCAAG
TTCGACCACC TGCTGTTTAC CGGCTCCGGG CTGACGGGCC GCGCCGTCAT GGCAGCAGCA
GCCCCCAATC TGTGCCCGGT GACACTGGAA ATGGGTGGCA AATCTCCCGC CATCATCTGC
GACGACTACC CCTTGCGCAA GGCGGCTGAA CGCCTGCTGT TTGTGAAGTG CTTCAACGCG
GGACAAATTT GCACCACCGT CGACCACGCG TACATCCCCA CTGCCAAGGT GAACGAATTT
GCGGCCATGG CCAAAGAAAT TGTGAGCATG CGCTACCCCA CATTGGACAC CCCTGACTAC
ACCTCCATGA TCGATGAACG CTCGTTCAAC CGCGTGGTTG CCGCCCTCGA AGAAGCGCAA
GAACGCGGCG CCACCCTGGT GCAACTCATC CCGGGCAAAC AGTGGGACAG TGCCAGCCGC
AAGATTGCCC CTCATATCGT GCTCAACGCA CCCCCAGACT GCGCCTTGCG CACCCGGGAA
ATCTTTGGCC CGGTGCTGCC GATCATTGCC TACACGTCCA TGGAAGAACC CATTCAGGCC
ATCAATGCCG GACCCCGTCC ACTGGCTCTG TACCCTTTCA GCAACGACAA GCCCTTGGTG
GAGCACCTGT TGCGCCACGT CATATCGGGC GGTGTCAGCG TGAACGATGG GCTATTCCAT
GTCGGCCAGC ACGATCTCCC TTTTGGCGGC GTGGGCGACA GCGGCATGGG CCACTACCAC
GGTCACGACG GTTTCGTCAC CTTCTCCAAA ATGCGCCCGG TGTTCTACCA GGCACCGTTC
AGCGCCATCA AGTTCCTGTG GCCGCCCTAT GGCAAATTCG CCACCCGCTA CCTGGACTTC
CTGACCCGCT AG
 
Protein sequence
MNTNPLYRAA PPTDLNPLDN GLEATLKLQR AAYFAHPYPS FSERKADLLQ LKALIRDNRD 
AIVAAISADY GNRSRHETLF AEIFSVMDGV DHTLKHLKQW MKPQRRGVDW KNFFGASNRV
IPQPLGIVGA IVPWNFPINL SFSGLIATFA AGNRSMVKMS ENSRHLAKLL IEKCPAYFPR
EKLAFFDETG GVGIEFSKLK FDHLLFTGSG LTGRAVMAAA APNLCPVTLE MGGKSPAIIC
DDYPLRKAAE RLLFVKCFNA GQICTTVDHA YIPTAKVNEF AAMAKEIVSM RYPTLDTPDY
TSMIDERSFN RVVAALEEAQ ERGATLVQLI PGKQWDSASR KIAPHIVLNA PPDCALRTRE
IFGPVLPIIA YTSMEEPIQA INAGPRPLAL YPFSNDKPLV EHLLRHVISG GVSVNDGLFH
VGQHDLPFGG VGDSGMGHYH GHDGFVTFSK MRPVFYQAPF SAIKFLWPPY GKFATRYLDF
LTR