Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0037 |
Symbol | |
ID | 3960466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 41353 |
End bp | 42753 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637914876 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_521330 |
Protein GI | 89898859 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCT TTATTGCAAT CGCAGTGCTT TTGACACTGT TGGTAATGGC CTGGATCGTG CGTCCCTTGC TGCGCCCGGC GCCGGCGGCG GGCGTCTCCA GCGAGCGCCT GAACGCTTCC ATTTATCGCG ATCAACTCGA TACGCTGGAG CGCGATCTGG CGCGCGGCGT CATCAGTCCG GCGGACTGTG AAGCCACCCG GGACGAATTG CAGCTGCGTC TGCTCGACGA CACCGAGGAA CCGGCGCCAA TTCAGCACAC CAGCGGCACC AGCATCTGGA CCGGGCGATT GACCGCCGCG CTGATTGTTG TGCTGATGCC GCTCGGCTCT GCAGGCATGT ACTGGCTGCT GGGCACGCCT GCGGCCATAG ATCCGGCAGC GTCACAAAAA GCCAACGAAG ATCAGGCCAT GAAAATGGTT AACAGCCTGG CCGCTCGCTT GCAGGCCAAC CCCGACAACC CCCAGGGTTG GGCCATGTTG GCGCGTTCCT ACAAAGTGAT GGGCCGCTTT GACGAGGCCG AACAGGCCTT CAAGAAGGCC GGTGACTTGG TCAATACCAA TCCGGACCTG ATGGTGGACT ACGCCGACCT GTTGGCTGTA CGCGCCAACA ACAACATCGA AGGCAAGTCG CTGGAGCTGG TGAATAAGGC TTTGAGCATA GACCCACAGC ATCCCATGGG TCTGATGATG GCCGGTGTGG CGGCCTATCG CCGCTCCGAC TTCAAGGGCG CCGTGAATCG CTGGGAAACA TTGCTGACGC TGCTTGAGCC CGGGTCACCC GATGCGCAGC AAGTGGAAAC CGACATTGCC GATGCGCGCG CCAAAGCCGG CCTGCCAGCG GCACAAAAAG TAACTGCACC ACCGGTGACC CCTGCGGCTG GGCCCGGCGC TGAAGCGGGC AAGCTGCCGC CGGTCGATCC CGCGGCGGCG GCGGCCATGA CCCCGGAAAT GATCAATCAA ATGGTGGATC GCCTGGCTGC GCGCCAGAAA GCCAATCCGG ATGACCTGCC GGGTTGGGTC CGGCTCGCAC ATGCCTACAA GGTGCAGGGC CGACTGGCAG ATGCAGAACA AGCCTATGCC AAGGCCAGCA AACTGGTGGA CAGTGATCCC GACTTGTTGA CCCAATATGC CGATGTACTG GCCACACGCG CCGACAACAA GATTGAAGGC CGTCCACTGG CCCTGGTGAA CAAGGCACTG GCCTTGAACC CCAAGCACCC GACGGCTTTG ATGATGGCCG GTACCGCCGC TTACCGGCGT GCTGACTATG CCCAAGCCGT GGCCCACTGG GAAAAAGTGT TAAGCGTACT GCCGCCCGGT TCCAGTGACG CGACACAGGT ACAGGCTGAA ATCGCCGATG CACGAGCCAA AGGCGGGCTG GGCTTGCTGG CCAAACCCTA A
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Protein sequence | MTVFIAIAVL LTLLVMAWIV RPLLRPAPAA GVSSERLNAS IYRDQLDTLE RDLARGVISP ADCEATRDEL QLRLLDDTEE PAPIQHTSGT SIWTGRLTAA LIVVLMPLGS AGMYWLLGTP AAIDPAASQK ANEDQAMKMV NSLAARLQAN PDNPQGWAML ARSYKVMGRF DEAEQAFKKA GDLVNTNPDL MVDYADLLAV RANNNIEGKS LELVNKALSI DPQHPMGLMM AGVAAYRRSD FKGAVNRWET LLTLLEPGSP DAQQVETDIA DARAKAGLPA AQKVTAPPVT PAAGPGAEAG KLPPVDPAAA AAMTPEMINQ MVDRLAARQK ANPDDLPGWV RLAHAYKVQG RLADAEQAYA KASKLVDSDP DLLTQYADVL ATRADNKIEG RPLALVNKAL ALNPKHPTAL MMAGTAAYRR ADYAQAVAHW EKVLSVLPPG SSDATQVQAE IADARAKGGL GLLAKP
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