| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0037 |
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| Symbol | |
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| ID | 3960466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 41353 |
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| End bp | 42753 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637914876 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_521330 |
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| Protein GI | 89898859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCT TTATTGCAAT CGCAGTGCTT TTGACACTGT TGGTAATGGC CTGGATCGTG
CGTCCCTTGC TGCGCCCGGC GCCGGCGGCG GGCGTCTCCA GCGAGCGCCT GAACGCTTCC
ATTTATCGCG ATCAACTCGA TACGCTGGAG CGCGATCTGG CGCGCGGCGT CATCAGTCCG
GCGGACTGTG AAGCCACCCG GGACGAATTG CAGCTGCGTC TGCTCGACGA CACCGAGGAA
CCGGCGCCAA TTCAGCACAC CAGCGGCACC AGCATCTGGA CCGGGCGATT GACCGCCGCG
CTGATTGTTG TGCTGATGCC GCTCGGCTCT GCAGGCATGT ACTGGCTGCT GGGCACGCCT
GCGGCCATAG ATCCGGCAGC GTCACAAAAA GCCAACGAAG ATCAGGCCAT GAAAATGGTT
AACAGCCTGG CCGCTCGCTT GCAGGCCAAC CCCGACAACC CCCAGGGTTG GGCCATGTTG
GCGCGTTCCT ACAAAGTGAT GGGCCGCTTT GACGAGGCCG AACAGGCCTT CAAGAAGGCC
GGTGACTTGG TCAATACCAA TCCGGACCTG ATGGTGGACT ACGCCGACCT GTTGGCTGTA
CGCGCCAACA ACAACATCGA AGGCAAGTCG CTGGAGCTGG TGAATAAGGC TTTGAGCATA
GACCCACAGC ATCCCATGGG TCTGATGATG GCCGGTGTGG CGGCCTATCG CCGCTCCGAC
TTCAAGGGCG CCGTGAATCG CTGGGAAACA TTGCTGACGC TGCTTGAGCC CGGGTCACCC
GATGCGCAGC AAGTGGAAAC CGACATTGCC GATGCGCGCG CCAAAGCCGG CCTGCCAGCG
GCACAAAAAG TAACTGCACC ACCGGTGACC CCTGCGGCTG GGCCCGGCGC TGAAGCGGGC
AAGCTGCCGC CGGTCGATCC CGCGGCGGCG GCGGCCATGA CCCCGGAAAT GATCAATCAA
ATGGTGGATC GCCTGGCTGC GCGCCAGAAA GCCAATCCGG ATGACCTGCC GGGTTGGGTC
CGGCTCGCAC ATGCCTACAA GGTGCAGGGC CGACTGGCAG ATGCAGAACA AGCCTATGCC
AAGGCCAGCA AACTGGTGGA CAGTGATCCC GACTTGTTGA CCCAATATGC CGATGTACTG
GCCACACGCG CCGACAACAA GATTGAAGGC CGTCCACTGG CCCTGGTGAA CAAGGCACTG
GCCTTGAACC CCAAGCACCC GACGGCTTTG ATGATGGCCG GTACCGCCGC TTACCGGCGT
GCTGACTATG CCCAAGCCGT GGCCCACTGG GAAAAAGTGT TAAGCGTACT GCCGCCCGGT
TCCAGTGACG CGACACAGGT ACAGGCTGAA ATCGCCGATG CACGAGCCAA AGGCGGGCTG
GGCTTGCTGG CCAAACCCTA A
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| Protein sequence | MTVFIAIAVL LTLLVMAWIV RPLLRPAPAA GVSSERLNAS IYRDQLDTLE RDLARGVISP
ADCEATRDEL QLRLLDDTEE PAPIQHTSGT SIWTGRLTAA LIVVLMPLGS AGMYWLLGTP
AAIDPAASQK ANEDQAMKMV NSLAARLQAN PDNPQGWAML ARSYKVMGRF DEAEQAFKKA
GDLVNTNPDL MVDYADLLAV RANNNIEGKS LELVNKALSI DPQHPMGLMM AGVAAYRRSD
FKGAVNRWET LLTLLEPGSP DAQQVETDIA DARAKAGLPA AQKVTAPPVT PAAGPGAEAG
KLPPVDPAAA AAMTPEMINQ MVDRLAARQK ANPDDLPGWV RLAHAYKVQG RLADAEQAYA
KASKLVDSDP DLLTQYADVL ATRADNKIEG RPLALVNKAL ALNPKHPTAL MMAGTAAYRR
ADYAQAVAHW EKVLSVLPPG SSDATQVQAE IADARAKGGL GLLAKP
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