Gene Rfer_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0025 
Symbol 
ID3960454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp27784 
End bp28506 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID637914864 
Producthypothetical protein 
Protein accessionYP_521318 
Protein GI89898847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.639222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCC CGCTCAATCC GAACGACCCC AATGTGGTGA TGCTGGAGCT GGTTGCGCGG 
CGGCTGGGTG CTGATTTGTG TAGCCGGTTT GCCTTTGTGG GTGGCTCGAT TGCAGGTTTG 
CTGATTACCG ATCCGGCCAA TCCACCCATC CGGTCAACGG AAGATGTGGA CATCGTGGCC 
GAAGTGCTGG CCCTGTCGGG TTACCACGGC ATCGAGAAGG CGCTGCGCGA ACGCGGCTTT 
ACCCAGGACA TGAGCGCCGA CGCGCCGATC TGCCGCTGGC AGGTGGAGGG TGTCACGGTA 
GACGTCATGC CCACGCTGGA GGAGATTCTT GGTTTTGCCA ACCGCTGGTA TCCACTGTGC 
GTGTCGACCG CCGAGTCGCT GGAGTTGCCC AGCGGTGTTG CCATCCGTGT CGTTCAAGCG 
CCGGTCTTTA TCGGCACCAA GTTGGAGGCA TTCCATGGGC GCGGTGGGGG CGATTATTTA 
TTCAGCCACG ATCTGGGCGA CATCATCAGC GTGGTGGATG GGCGCGACAG CTTGCTTGGT 
GAATGCGAGC AGATGCCCGA AGAGTTGCGA GGCTATCTTG CCGAGCAGTT TTCAGCATTG 
CTGGCTGATC GCCGCTTTTT GGACGCCTTG CCGGGTCATT TGCCGGGTGA TGTCATGAAC 
CAAAGCCGCC TTCCCGACCT GGAAGCCAAA ATTCAACAAC TTGCGACCCT GTCCAAAATA 
TGA
 
Protein sequence
MTRPLNPNDP NVVMLELVAR RLGADLCSRF AFVGGSIAGL LITDPANPPI RSTEDVDIVA 
EVLALSGYHG IEKALRERGF TQDMSADAPI CRWQVEGVTV DVMPTLEEIL GFANRWYPLC 
VSTAESLELP SGVAIRVVQA PVFIGTKLEA FHGRGGGDYL FSHDLGDIIS VVDGRDSLLG 
ECEQMPEELR GYLAEQFSAL LADRRFLDAL PGHLPGDVMN QSRLPDLEAK IQQLATLSKI