| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0007 |
|---|
| Symbol | |
|---|
| ID | 3960243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 8487 |
|---|
| End bp | 11159 |
|---|
| Gene Length | 2673 bp |
|---|
| Protein Length | 890 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637914846 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_521300 |
|---|
| Protein GI | 89898829 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCC GCAACCTCGA CTCACTGTTT GCCCCCGCCT CGATCGCGGT GTTTGGCGCC
TCCCTGCGTG TCGGCAGTGT CGGTGCCACG GTGTGGCACA ACCTGAGTTC AGGCCACTAC
CAGGGCGCGC TTTACGCCGT CAACCCCAAG CACCACAAGC TTGGGAACCA TCCGGTGGTG
GCCAAAGCCT CTGATCTACC TGAAGTACCC GCCCTGGCCG TGATCTGCAC GCCACCTGCC
AGCGTGCCGG GCTTGATTGA AACTCTGGGC CGCCTGGGCA CGCGCGCCGC CGTGGTGATG
ACCGCCGGCA TGAACGACCA GCAAAAGCAA GCCATGCTGG ACGCGGCAGG CGCGCACTTG
TTGCGTATTT TGGGGCCCAA CTGCATCGGG CTGCTGGCAC CGCATCAAGG CCTGAATGCC
AGTTTTTCCC ACATTGACGC GCAACCCGGT GAGGTGGCTT TTGTGTCGCA GTCCGGCGCC
TTGGTCACGG CCATGCTGGA CTGGGCGCAA GGACGCGGCA TCGGCTTCTC CTATTTTGTA
TCCCTGGGTG AACACGCCGA CGTGGACTTT GGCGACATGC TCGACTATCT GGCCAGCGAC
GCCAAAACAC GGGCGATTCT GCTGTATGCC GAATCGATCG AATCACCGCG CAAATTCATG
TCGGCGGCGC GCGCGGCGGC GCGCAACAAG CCGGTGATTG TGGTCAAGGC AGGGCGCTCG
GCGCTGGGCC AACTGGCGGC CGCGTCGCAC ACAGGCGCAC TGGCCGGCTC CGACATGGTG
TTTGAAGCCG CGATTGCCCG CGCCGGCATG TTGCGGGTCA ATACATTGCA AGAGCTGTTT
CTGGCGGCCG AGACCCTGTC GCGCTTTCGC ACCAACACCA GCGAAACCAT CACCATCCTG
ACCAATGGCG GCGGGGCCGG CGTGATGGCG GCTGACGCAG CCGCCTTTGC CGAGGTCGAG
CTGACACAAC TCAGCGGCAG CACACGACAA AAGCTCGATG CCGTGTTGCC CGCCAACTGG
TCGCACGGCA ACCCGGTGGA CATCATCGGT GACGCGCCGG TGTCGCGCTA TGAGCAAGCC
TTGCAAGTGC TCAAGGACGA TCCCGGCAGC GGGGCCGTGT TGTTTATTCA CGCGCCCACG
GCCATTGTGC CCAGTGCCGA CATTGCTCGG GCACTGGTGC CGCTAGCCCA GCATCAACCC
GGCATGCCGC CCCGGCTCAT GAGCTGCTGG CTGGGCGACA AGGCGGTCCA GCAGGCACGC
CAGCTATTCC AGGACGCGGA CATTGCCAGC TTTGACACGC CAGAGCAGGC CATCAGCGCG
TTCTCCATGC TGCAGCGCTA CAGGCGCAAC CAGGCCGAGC TGATGGAGGC GCCACCGGCC
TTGCTGGCGG AGTTACGTCC CGACACCGCG ACCATCCGGG CGCTGGTGCT GGACGCGTTG
GCGAGTGGCC GCGAGATGCT GACCGAGCCC GAGGCCAAGG CGGTGCTGGA TGCCTGCCAC
ATTCCGGTGG TGCCGACGCG GCGGATCCGC GCCACCGCAG CGGCGGCCGT CAAGGCCGCG
TTGACCATTG GTTTTCCGGT GGTACTGAAA ATCTTGTCGG ATGACATTTC ACACAAGTCA
GACGTCGGTG GAGTGGCCCT CAATTTGCAG GACGAAAACG ATGTGCGTGC GGCCGCCCGA
ACCATGCTCG CCCGCGTCAA GCGCCAACAG CCCAACGCGC GTATTCAGGG CTTCACGGTG
CAGGCCATGG TGCGGCGCCC GCATGCCCAG GAACTGATTG TGGGCAGCAC CATTGACCCC
GTGTTTGGCC CGGTGATTCT GTTTGGCCAG GGCGGCACTG CCGTCGAGGT CACGGCCGAC
CGCGCAATAG CCTTGCCGCC CCTGAATGAG CCGCTGGCCA GGGCGCTGGT GTCGCGAACC
CGGGTGGCGC GCCTGCTGGC CGGTTGGCGC GACACGCCCG CGGTGGACGA GGCGGCGCTG
CATCGGGTGC TGGTGGCGGT TTCGCAGTTG CTGGCGGAAA TTCCGGAGAT TGCCGAGCTC
GATATCAACC CGCTGATCGT CAACTTTGAA GGCGCGATGG CGCTTGATGC GCGCATCCGC
CTCAGTGCAG CGGCCCCGGC CGGGGCGAGC AACTTCGCCA TCCGGCCGTA TCCCGCCCAG
TTGGAGGAAA CCGTCCAGTG GCAGGGGCGT GACTTGTTTT TGCGCCCGAT TCGGCCTGAG
GACGAGGCTT TGCACATGGC GTTTTTGCAG CAACTGGACC CGGAAGACGT TCGTATGCGG
GTTTTCTACA CCCGGCGCAA CATCGAACGC TCCGAGCTCG CGCGTCTGGT GCAAATCGAC
TATGCGCGTG AAATGGCCTT TGTGGCGCAA GCCACCGGGC CGGATGGTCA GTTGCAGACC
TTGGGCGTGG CGCGCGCCAT GGCCGACCCC GACAACGTGG ACGCCGAGTT TGGTGTGATC
GTGCGTTCAG ACCTCAAAGG CACGGGTCTG GGGCGCTTGC TGATGGAAAA GCTGGTTGCC
TACCTGCGTG CCCAGGGCAC CCAGCGGCTG GTGGCCACCG TGCTGGATTA CAACGAGCGC
ATGCTCAAAT TGGCCAGGGA CATGGGCTTC CAGGAAGACC CGACGAGCAA AAATGGCGAA
GGCACGAAAG GCATTTTTCT GCCGCTCACT TGA
|
|---|
| Protein sequence | MSIRNLDSLF APASIAVFGA SLRVGSVGAT VWHNLSSGHY QGALYAVNPK HHKLGNHPVV
AKASDLPEVP ALAVICTPPA SVPGLIETLG RLGTRAAVVM TAGMNDQQKQ AMLDAAGAHL
LRILGPNCIG LLAPHQGLNA SFSHIDAQPG EVAFVSQSGA LVTAMLDWAQ GRGIGFSYFV
SLGEHADVDF GDMLDYLASD AKTRAILLYA ESIESPRKFM SAARAAARNK PVIVVKAGRS
ALGQLAAASH TGALAGSDMV FEAAIARAGM LRVNTLQELF LAAETLSRFR TNTSETITIL
TNGGGAGVMA ADAAAFAEVE LTQLSGSTRQ KLDAVLPANW SHGNPVDIIG DAPVSRYEQA
LQVLKDDPGS GAVLFIHAPT AIVPSADIAR ALVPLAQHQP GMPPRLMSCW LGDKAVQQAR
QLFQDADIAS FDTPEQAISA FSMLQRYRRN QAELMEAPPA LLAELRPDTA TIRALVLDAL
ASGREMLTEP EAKAVLDACH IPVVPTRRIR ATAAAAVKAA LTIGFPVVLK ILSDDISHKS
DVGGVALNLQ DENDVRAAAR TMLARVKRQQ PNARIQGFTV QAMVRRPHAQ ELIVGSTIDP
VFGPVILFGQ GGTAVEVTAD RAIALPPLNE PLARALVSRT RVARLLAGWR DTPAVDEAAL
HRVLVAVSQL LAEIPEIAEL DINPLIVNFE GAMALDARIR LSAAAPAGAS NFAIRPYPAQ
LEETVQWQGR DLFLRPIRPE DEALHMAFLQ QLDPEDVRMR VFYTRRNIER SELARLVQID
YAREMAFVAQ ATGPDGQLQT LGVARAMADP DNVDAEFGVI VRSDLKGTGL GRLLMEKLVA
YLRAQGTQRL VATVLDYNER MLKLARDMGF QEDPTSKNGE GTKGIFLPLT
|
|---|
| |