| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4164 |
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| Symbol | |
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| ID | 3936653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4273889 |
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| End bp | 4274434 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906550 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_512106 |
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| Protein GI | 89056655 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.963682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATC TCAAGGAAAC GCCATCGCAA ACCGCCGGTC CATACGTGCA CATCGGCCTT
GCGACCGAAG CGGCGGGCTT CACCACGTTC CCGGCCTTTG GCGCGCAGAT CTTCAGTCCA
GACATCCCCG GCGAGCGTAT TCGCGTGGGA GGTCGCATCC TTGACGGAGA CGGCGCACCG
ATGACCGACG CGCTTCTGGA GATCTGGCAG GCGGACGCTT CTGGCACCTA CAGCGACAGT
GCCGAGGGCT TCGGTCGTAT CGTGCCGGAT TTTGAGACCG GCGCTTATGG CTTTGACACC
ATCAAGCCCG GTGCCACCAA CGGCGCGCCG CATCTGCATC TTTGGCTGGT CGCGCGGGGC
ATAAACCTGG GGCTGCACAC GCGGATGTAT TTTGAGGATG AGGGGGAGGC CAATGCCGCA
GACCCTGTGT TACAGGGCCT TGATCTCGAG CGACGCGCAA CCCTAATTGC CGCGCGCGAC
GGCACGACTT ACCGCCTCGA CATCCGTGTT CAGGGCGACA ATGAAATGGT GTTCTTCGAT
GTCTGA
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| Protein sequence | MSDLKETPSQ TAGPYVHIGL ATEAAGFTTF PAFGAQIFSP DIPGERIRVG GRILDGDGAP
MTDALLEIWQ ADASGTYSDS AEGFGRIVPD FETGAYGFDT IKPGATNGAP HLHLWLVARG
INLGLHTRMY FEDEGEANAA DPVLQGLDLE RRATLIAARD GTTYRLDIRV QGDNEMVFFD
V
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