Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4163 |
Symbol | |
ID | 3936652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4273173 |
End bp | 4273889 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637906549 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_512105 |
Protein GI | 89056654 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.68973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC ATGCCCCCCG CGATCTGTCT CGCCATCCTG CCGCGCTGAC ACCACGCTAC AGAAGCTCTG TCCTGCGATC GCCGAAACAG CGGCTGATCG CGCTGCCCGA TGGTCCTGCG GATCGTACGG GGCCGACCTT TGGCCACGAC ATGATCGGCG CATTGGACCA CGATCTGATC CTGAACCACG CCCACGACGG TGCGCCTGTA GGGGAGCGGA TCATCGTCCA CGGCCGCGTG CGGGATGAGG ATGAACGACC CGTTCGGAAT ACTTTGGTGG AGGTTTGGCA GGCCAACGCG TCGGGTCGCT ATCGACATAA GAAAGATACG TTCATGGGCG CGATAGATCC CAACTTTGGC GGTTGCGGGC GGACAGTGAC GGACGATCAG GGCTACTACC GGTTCAACAC GATCAAGCCG GGCGCCTATC CGTGGCCCAA TGGCGGCAAC AACTGGCGGC CTGCCCATAT CCATTTCAGC GTCTTTGGGG CCGCATTTTG CCAGCGCCTG ATCACTCAGC TTTACTTCGA AGGCGACCCT CTGATCCCGC TATGTGACAT CGTTCAGACT GTGCCCGACC CGCGGGATAT CGACATGTTG ATGGCCAAGC TGGATATGGA AACCACCCTG CCTTTCGACA GCATAGCCTA CCGGTTCGAC ATCGTCTTGC GAGGCGCAAG ATCGACCCCG TTCGAAAACC GGATGGAGGG CAACTGA
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Protein sequence | MSIHAPRDLS RHPAALTPRY RSSVLRSPKQ RLIALPDGPA DRTGPTFGHD MIGALDHDLI LNHAHDGAPV GERIIVHGRV RDEDERPVRN TLVEVWQANA SGRYRHKKDT FMGAIDPNFG GCGRTVTDDQ GYYRFNTIKP GAYPWPNGGN NWRPAHIHFS VFGAAFCQRL ITQLYFEGDP LIPLCDIVQT VPDPRDIDML MAKLDMETTL PFDSIAYRFD IVLRGARSTP FENRMEGN
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