Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4107 |
Symbol | |
ID | 3936596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4214725 |
End bp | 4215510 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637906493 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_512049 |
Protein GI | 89056598 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGA TCAAACTGCT CTGCCTGCTG CTTCTGGCCG TCTTCATCCT GCTCCCCTTC GTGCAGGTGG CACAGCTCAG CGTGATCTCC ACCCTCGGGA CGCCCGACGC GCCCCTGGGC ACCGTCACCA CCCTGAATTA CCGCAACATC TTTGCATCCA GCGCGCTGAC GTCGTCGCTG GTGAATTCCG TGACCTATGT GACCCTCAAC GTGGCCCTCA CCCTGCTGGT CGCCCTGCCC GCCGCCTATG CCATCTCACG CCACCAGTTT CGCGGCAAGC GGGCGTTCTT CATCACGTTG CTGGCGTTTC GCGTGACCCC GCCTGTCGTA CTTTCGCTGC CAGTCTTCAT CTGGTTTTCG CAGCTGAACC TGATCAACAC GCCCATTGGA ATCGCCCTGG TCCATTGCGT CTTCAACGTG CCCATCGCGA TCTGGATATT GGAAAGCTTC ATTTCTGCCG TTCCCCGCGC CTATGACGAG TCCGCCAGGC TGGACGGCTA TTCCACGACA CGATTCTTCT ACACCTTCCT CATCCCCGTC ATCGCGCCGG GCATCGGGGT CACGATGTTC TTCTGCTTCG TGTTCTCATG GGTGGAGGTC GTGTTCGCGC GCACCCTGAC CGTGACAGAC GGCAAGCCGA TCACCATGGC GATCAGCAAT CTGTTCGGCT TCAACACGGA TGTCGGGCTG GTTATGGCGA TGACCGTTTT TTCGCTGCTG CCGGGGTTGG TGATGATCTA TTTCGTCCGG CACCACATCG CGCGCGGGTT TGTGGTACGG GCCTAG
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Protein sequence | MKAIKLLCLL LLAVFILLPF VQVAQLSVIS TLGTPDAPLG TVTTLNYRNI FASSALTSSL VNSVTYVTLN VALTLLVALP AAYAISRHQF RGKRAFFITL LAFRVTPPVV LSLPVFIWFS QLNLINTPIG IALVHCVFNV PIAIWILESF ISAVPRAYDE SARLDGYSTT RFFYTFLIPV IAPGIGVTMF FCFVFSWVEV VFARTLTVTD GKPITMAISN LFGFNTDVGL VMAMTVFSLL PGLVMIYFVR HHIARGFVVR A
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