| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4088 |
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| Symbol | |
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| ID | 3936577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4194923 |
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| End bp | 4195750 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637906474 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_512030 |
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| Protein GI | 89056579 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.350213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTA AACAGAAAAA ACAGATGTGG CGCGCGATCC AGTCCGTTCT GATCGTGCTG
GCCGCCTTCA TCATGCTGGT CCCGATCATC TGGATCTTCC TCGCGTCGTT CAAATCCCAC
GTGGAAGTCT ACCAACTGCG TCTGTTCTTC ACCCCCACTT TGGAGAACTA CGGCACGGTG
TTTGAGGAGC CCTACAACCT CGGTGCGAAG CTTTTCAATT CCACCATCGT GGCGTTCATC
ACCGTAATCT TCGCCATTCC CATCGCCACC ATGGCGGCAT ACTCATTCAG TCGGTTCCGT
CTGAAGTTCG AGACGACCAT CCTCGTCGTC ATCCTCGCCA CCCAATTCGT GCCGGCGGTG
GTGATCATCC TGCCCTTCTT CATCATGTTC CGCGATATTG GCCTTCTGGA CACGCGGATC
GGGCTGATCC TCGTGAACCT CGCCATCGTC ATGCCCTTTG CGATCTGGAT GATCAAAGGT
TTCATCGACA GCATCCCCAT GGACACGGAG GAGGCCGCAA TGGTCGACGG CTCGTCGCGC
CTGCAAGTGA TCAAGAACAT CGTCTTGCCT ATGGCGGCCC CCGGCCTCGT GACCGCGTCG
ATCTTTTGTT TCATCCTGGC GTGGAACGAG TTCCTTTTCG CGCTGTTCCT GACGAACCGA
GACGCCGTGA CCCTGCCCAT CGGTCTTGCC CTCTTCCGGG GCGAGGAAGG CGATTTGTGG
AACCTGCTAT CCGCCGCGGG CATCATCATC ATGGCTCCGA TGTTCGTCCT CGCTTTGGCC
ATCCGCAAGT ACTTCGTCCA GGGCATGACG ATGGGGGCGG TGCGATGA
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| Protein sequence | MTGKQKKQMW RAIQSVLIVL AAFIMLVPII WIFLASFKSH VEVYQLRLFF TPTLENYGTV
FEEPYNLGAK LFNSTIVAFI TVIFAIPIAT MAAYSFSRFR LKFETTILVV ILATQFVPAV
VIILPFFIMF RDIGLLDTRI GLILVNLAIV MPFAIWMIKG FIDSIPMDTE EAAMVDGSSR
LQVIKNIVLP MAAPGLVTAS IFCFILAWNE FLFALFLTNR DAVTLPIGLA LFRGEEGDLW
NLLSAAGIII MAPMFVLALA IRKYFVQGMT MGAVR
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