| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4056 |
|---|
| Symbol | |
|---|
| ID | 3936544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4161326 |
|---|
| End bp | 4161664 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637906441 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_511998 |
|---|
| Protein GI | 89056547 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.559435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTCA TCATTGCAGC AATCAAACCA TTCAAGCTGG AGGAAGTTCG CGAAGCGCTG
ACGGCCATCG GCGTGCGCGG GATGATGGTG ACAGAGATCA AGGGCTTCGG CTCTCAGTCC
GGCCACACCG AGATCTATCG CGGCGCGGAA TACGCCGTGA ACTTCGTGCC GAAGGTGAAG
CTGGAGATCG TGGTCGCCGC CTCCATGGCC GATCAGGTCG TCGAAACGAT CCAGACCACC
GCCAAGACCG ACAAGATCGG CGACGGCAAG ATCTTCGTGC TCGACGTGCA AAGCGCTGTG
CGCGTGCGGA CCGGCGAAAC CAACGATGAC GCGCTTTAA
|
|---|
| Protein sequence | MKLIIAAIKP FKLEEVREAL TAIGVRGMMV TEIKGFGSQS GHTEIYRGAE YAVNFVPKVK
LEIVVAASMA DQVVETIQTT AKTDKIGDGK IFVLDVQSAV RVRTGETNDD AL
|
|---|
| |