Gene Jann_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4033 
Symbol 
ID3936521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4137570 
End bp4138091 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID637906418 
Producthypothetical protein 
Protein accessionYP_511975 
Protein GI89056524 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.773314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC GTGAGCATTT AAAGGGGGAT GCGGCCTCCG TCGCTGTGTA TTCCGACTGT 
GAGCGGTATC GGTATGCGCT GACCCGTGTC TGGGATGCAG ACGGTCAGCG GGCGCTTTTC
ATCATGCTCA ACCCCTCCAC CGCGACCGAG GTGCAGAATG ACCCGACCGT GGAGCGCTGC
GAGCGGCGCG CGCGGACGCT GGGGTTTGGC GCATTTCGGG TGCTCAACAT CTTTGCTTAC
CGCGCCACGG ATCCGCGTGA CATGCGGCGG GCTGCCGATC CGGTCGGGCC TGCAAACGAC
GCGGCGATTC TGGCGGGCCT GGACTGGGCC GACCGGGTCA TCTGTGCCTG GGGCACCCAT
GGGGAGCATC TGGCGCGCGG CCCTGCGGTG GCGGATTTGC TGTGGGGCAC CGGGCGGGAA
TTGCTGCATC TGGGCCTGTC GAAAGCGGGG CATCCGAAAC ATCCGCTCTA CATTGGATAC
AAAGTCCAAC CGCAGGTGTG GGAGATGCGC AATGGCGATT GA
 
Protein sequence
MIEREHLKGD AASVAVYSDC ERYRYALTRV WDADGQRALF IMLNPSTATE VQNDPTVERC 
ERRARTLGFG AFRVLNIFAY RATDPRDMRR AADPVGPAND AAILAGLDWA DRVICAWGTH
GEHLARGPAV ADLLWGTGRE LLHLGLSKAG HPKHPLYIGY KVQPQVWEMR NGD