| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4005 |
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| Symbol | |
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| ID | 3936493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4109020 |
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| End bp | 4110174 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637906390 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_511947 |
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| Protein GI | 89056496 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCACG ACACCCACCC ACCCGCAGAC CTTCTGGACG GCGTGCGATT TAACGAAGGG
GAGCGTCTGA TGTTCTACCG TGAAGCGGGC GATTACAAAA CGTCCTATGC CGCCGACAAC
CAAACCTTCC CGATCCTGTT TGATCGGTAT CGGTACTACT TTGTCCTGAT CGTGGGCGCG
TTGATCATTC CGTTCGTGCT GAATGATTAC TGGGCGAACT CGATTCTGAT CCCGTTCCTG
ATCTATGCGA TTGCGGCTAT CGGGCTGAAC ATTCTGACGG GCTATTGCGG GCAGGTCAGC
CTTGGCACGG GCGGGTTCAT GGCCGTTGGG GCCTATACGT CCTACAAGCT GATGACGGCG
TTTCCGGGCC TCGACATGAT CTCGGTCACG CTTCTATCGG GTGTGATGAC GGCGATGGTC
GGTGTGGCGT TTGGCCTGCC GAGCCTGAGG ATCAAGGGGT TTTATCTGGC CGTAGCCACG
CTGGCGGCGC AGTTCTTCCT GGTGTGGCTC TTCAACAAGG TGCCGTGGTT CTACAATTAC
TCCGCCTCGG GCCAGATCTC CGCGCCGGAG CGGGATTTCT TCTACTTCAC GGGCATTCCC
GTCACCGGCC CCAATGCAGA GGCCTGGGCG AAATATCTGT TCTGTTTCCT GTTCGTCTTC
GTGCTGGCCT GGGTCGCGCG GAACCTGACG CGGGGCAGCG TGGGGCGGCA GTGGATGGCG
ATCCGCGATA TGGACATCGC CGCAGAAATC ATTGGGGTGA ATCCGTTGAA GGCGAAGCTG
ACGGCCTTTG CGGTCAGCAG CTTCTACGTT GGTATCGCGG GGGCGCTTTT GTTCACCGTG
TATCTGGGCG CGGTGGAAGT GGGCGAGGTC TACGGCATCA CCAAGAGCTT TCTGGTGCTG
TTCATGATCA TCATCGGCGG GTTGGGCAGT ATCTTCGGCA GCTTTGCGGG CGCGGCGTTC
ATGGTGATCT TGCCGGTCGT TTTGCGCAAC TTCCTGACCG GCACGATGAA TTGGGACAGC
GCGCTTGCCA CCCACTTCGA GTTCGTCATC GTGGGGGCGT TGATCATGTT CTTCCTGATC
GTGGAACCGC ACGGGTTGGC ACGCCTTTGG GCGCTGGTGA AAGAGAAATT GAGATTGTGG
CCGTTTCCGC ATTAG
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| Protein sequence | MAHDTHPPAD LLDGVRFNEG ERLMFYREAG DYKTSYAADN QTFPILFDRY RYYFVLIVGA
LIIPFVLNDY WANSILIPFL IYAIAAIGLN ILTGYCGQVS LGTGGFMAVG AYTSYKLMTA
FPGLDMISVT LLSGVMTAMV GVAFGLPSLR IKGFYLAVAT LAAQFFLVWL FNKVPWFYNY
SASGQISAPE RDFFYFTGIP VTGPNAEAWA KYLFCFLFVF VLAWVARNLT RGSVGRQWMA
IRDMDIAAEI IGVNPLKAKL TAFAVSSFYV GIAGALLFTV YLGAVEVGEV YGITKSFLVL
FMIIIGGLGS IFGSFAGAAF MVILPVVLRN FLTGTMNWDS ALATHFEFVI VGALIMFFLI
VEPHGLARLW ALVKEKLRLW PFPH
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