Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3971 |
Symbol | |
ID | 3936452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4068593 |
End bp | 4069273 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637906349 |
Product | Fe-S type hydro-lyases tartrate/fumarate beta protein |
Protein accession | YP_511913 |
Protein GI | 89056462 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.958609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCA CACCGAACAA ACCCCGCGAA ATTACCCTGT CCACCACACC GTCGGCTGAA GCCATCGCGG ACCTGCGCCT GGGCGATGTC GTCTACCTCT CCGGCCTGAT GTATACGGCG CGCGAGGGCG TCTACATGCG CGCCCTGGAG GACCGCGCAA ACATTCCGAT GGAACTGCCC GCGCAATCGG CTGCGAACTT CCATTGCTCG CCCGCGGCCC GGATCAACGC CGATGGCTCG TTCGACATGG GGGCCGTGAC GGCCACAGCG AGCTTCCGAT TTGCCAAGTG GTTGCCCGAA TGGATGGCCA AGACCGGCGC GAAGCTGATT GTGGGCAAGG GTGGCATGAC CTCAAAGGAC TACAAGGAAT ATTTCGTGCC CAACGGCGCA GTCTATCTGT CGACCGTGGG CTACGGCACC GGCGCGCTTC TGGGGCGCGG GGTGGAGAAT GTGGAGGCTG TGCATTGGAA TGAAGAGCTT GGGATCGCGC AGGCGATGTG GGTTCTGAAA TGCAACAGAA TGGGGCCGTT CATCGTGGCG TCCGATATGA ATGGCGATTG CCTGTTCGAA CGGGAGAACG CCAAGATCGC GGAGAACGTC GCGCGCGTTT ACGAGGGCAC GAAGCCCGCG ACGCTGAAAC GGTACGGCGA GAGTGATGAC CGCACGGATG AAGTTATCTA G
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Protein sequence | MSPTPNKPRE ITLSTTPSAE AIADLRLGDV VYLSGLMYTA REGVYMRALE DRANIPMELP AQSAANFHCS PAARINADGS FDMGAVTATA SFRFAKWLPE WMAKTGAKLI VGKGGMTSKD YKEYFVPNGA VYLSTVGYGT GALLGRGVEN VEAVHWNEEL GIAQAMWVLK CNRMGPFIVA SDMNGDCLFE RENAKIAENV ARVYEGTKPA TLKRYGESDD RTDEVI
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