| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3931 |
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| Symbol | |
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| ID | 3936412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4027906 |
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| End bp | 4029375 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637906309 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_511873 |
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| Protein GI | 89056422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACG CGGATATCAT CATCGTCGGC TCCGGGATGG GGGGCGCGAC ACTGGCCGCC
GGGCTGGCGC CCTCGGGCCT GCGGGTGCTC GTTCTGGAAC GCGGGCAGCT GCTCCATGAT
TGCCCGGAAG CCCGCGACCC GGAGGCGATC TTCAAAGACG GCCACTTTCG CCCGGACGAG
ACCTGGCTGA CCCCCGATGG CACCCGCTTC AACCCCGGCA ATTACGCCTG CGTCGGCGGC
AATTCCAAGT TCTACGGTGC GGTCATGCTC CGCTACCGGG AAGCGGACTT CGCCCCGATC
CGCCACCTCG GCGGCACCAC CCCCGGCTGG CCCATCGACT ACGCAACCCT CGCGCCGTTC
TACGCCCGCG CCGAAGCGCT CTACCAGGTG CGCGGCGACG GCACGCTGGA CCCGACGGAA
CCGCCTCGCG GCGACTACAC CTTCCCGCCT GTCCCCCACG AGCCGGACAT CATTGACCTC
GCCCTGCGCC TGAAACGGGC CGGGCTGACC CCGTCGCCCC TGCCGCTGGC CGTCGATCTG
GAGCGGTGGC TCAGCCGGGC CAAGACCCCG TGGGACGCCT TCCCGGATAC AAACGGCGGC
AAGCTGGATG CCGAAAGCGC CGCAATGGTG CAGGCGTTGG CGCATCCGAA TGTGACGCTG
CGCACCGGGG TTGAGGTGCG TAAGATCGAG GTTGAAGGCG GCCAAGTGAC CGGTTTGCTG
ACCTCCGCCG GGCGGCTGAC TGCACCCCGG ATCGTCCTGG CGGCGGGGGC CGTGCATACG
GCGGCGCTTT TGTTGCGCTC AAAGGATGAG GCGCATCCAA ACGGCCTGGC CAACCGCTCC
GATCAGGTCG GGCGCAACTT CATGAACCAC AACACCAGCG CCGTGTTGGC GCTCAGCCCG
CGGCGCAACC GCTCCGTCTA TCAAAAGACG CTCCAGATCA ACGATTGGTA TCTGTCCGGC
GGCCTGGACG GCACGCCTTT GGGCAATGTG CAGCTTTTGG GCCGCGTCTC TGCGCCCATC
CTTGCGGCCC AAACGGGGAT GCCGATGGTC GCAGCCAGAG CCATCGCGGG CCGGGCGATT
GATTTCTACG CCATGTCCGA GGATTTGCCG GACCCGGACA GCCGCGTGAC GGTGACGGGC
GATGACATCG TGTTGGACTG GAAACGCTCC AACTGGGACG CGCATCTGGC GCTGGTGGCA
AAGCTGACGG CGACGCTCAA ACGCGCGGGC TTCCCGGTGG TCCTGTCCAA AGCGTTCGAT
CGCCGCACGC CGTCCCACCA ATGTGGCACC GCGCGGGTCG GAGACAATCC CGCGACGTCA
GTGTGTGACC CGTTTGGGCG CACCCACGAC CACCCGAACC TGTTTATCTG CGACGCGTCG
CTGCTGCCGA CATCGGCTGC CGTGAACCCC TCGCTCACCA TCGCCGCTTT GGCCCTGCGC
CAGGCAGACC ATCTATTGGA GACCACATGA
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| Protein sequence | MSDADIIIVG SGMGGATLAA GLAPSGLRVL VLERGQLLHD CPEARDPEAI FKDGHFRPDE
TWLTPDGTRF NPGNYACVGG NSKFYGAVML RYREADFAPI RHLGGTTPGW PIDYATLAPF
YARAEALYQV RGDGTLDPTE PPRGDYTFPP VPHEPDIIDL ALRLKRAGLT PSPLPLAVDL
ERWLSRAKTP WDAFPDTNGG KLDAESAAMV QALAHPNVTL RTGVEVRKIE VEGGQVTGLL
TSAGRLTAPR IVLAAGAVHT AALLLRSKDE AHPNGLANRS DQVGRNFMNH NTSAVLALSP
RRNRSVYQKT LQINDWYLSG GLDGTPLGNV QLLGRVSAPI LAAQTGMPMV AARAIAGRAI
DFYAMSEDLP DPDSRVTVTG DDIVLDWKRS NWDAHLALVA KLTATLKRAG FPVVLSKAFD
RRTPSHQCGT ARVGDNPATS VCDPFGRTHD HPNLFICDAS LLPTSAAVNP SLTIAALALR
QADHLLETT
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