| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3889 |
|---|
| Symbol | |
|---|
| ID | 3936370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3985662 |
|---|
| End bp | 3986645 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637906267 |
|---|
| Product | zinc-binding alcohol dehydrogenase |
|---|
| Protein accession | YP_511831 |
|---|
| Protein GI | 89056380 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0106783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA AGATGCGCGC AGTGGAGATT TCCGAGCCCG GAGGCCCTGA TGTTCTGCGC
CCCTGCGAAC GACCCGTTCC CGTGCCGGGG GCAGAGCAGA TTGCGATTAC CATTGACCAT
GCGGGCGTAA ACCGCCCCGA TGCGCTGCAA CGGGCGGGCA GCTATGCGCC GCCGCCGGGC
GCCTCAGATC TGCCGGGGCT GGAAGCATCG GGTCGGGTGG CCGAAATCGG CCCCGGCGTC
ACACGATGGT CCGTGGGCGA TAAGGTCTGC GCGCTCTTGC CGGGCGGGGG CTATGCCGAG
CATGTGGTGA CGCATCAGGA CCACGCACTG CCCGTGCCAG ACGGCTTGTC GATGGCCCAG
GCCGCGGCCT TGCCAGAGAC GTTTTTCACA GTCTGGAGCA ACGTGTTCAT GCGGGCCGGT
CTGCGCGCCG GGCAGCGGTT TCTTGTCCAT GGCGGCTCCA GCGGGATCGG CACGACAGCT
ATCCAACTGG CGCATGCATT GGGTGCGCGG GTTTTCACAA CCGCTGGTTC GGCCGAAAAG
TGCGCGGCCT GCCTGGAATT GGGGGCCGAG CAGGCGATCA ACTATCGCGA CGCGGATTTT
GTGGCGGCGA TGCGGGATGT CGGTGGCGCG GACGTCATCC TCGATATGGT GGGCGGTGAC
TATCTGCCGC GCAACATCAA GGCTTTGGCC GACGACGGGC ACCTGCAACA GATCGCCTTT
CTGCAAGGCC CGAAGGTGGA GCTGAACTTT GCGCAACTGA TGGTGCGACG GCTGACGATC
TCGGGCTCGA CCCTGCGGCC CCAATCCGAT GCGGCGAAGG CTGCGATTGC ACAGGAACTG
CGCGAGAAGG TTTGGCCATT GCTAAGCGCC GGGCGTATCG CGCCGGTAAT GGACCAGACC
TTTGCGCTGG AGAACGCGGC GGATGCTCAT GCCCGTATGG AGAGCTCAGC GCATATTGGG
AAGATCGTGC TGAAGGTAAG TTAG
|
|---|
| Protein sequence | MENKMRAVEI SEPGGPDVLR PCERPVPVPG AEQIAITIDH AGVNRPDALQ RAGSYAPPPG
ASDLPGLEAS GRVAEIGPGV TRWSVGDKVC ALLPGGGYAE HVVTHQDHAL PVPDGLSMAQ
AAALPETFFT VWSNVFMRAG LRAGQRFLVH GGSSGIGTTA IQLAHALGAR VFTTAGSAEK
CAACLELGAE QAINYRDADF VAAMRDVGGA DVILDMVGGD YLPRNIKALA DDGHLQQIAF
LQGPKVELNF AQLMVRRLTI SGSTLRPQSD AAKAAIAQEL REKVWPLLSA GRIAPVMDQT
FALENAADAH ARMESSAHIG KIVLKVS
|
|---|
| |