| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3837 |
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| Symbol | |
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| ID | 3936317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3931536 |
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| End bp | 3932588 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637906215 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511779 |
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| Protein GI | 89056328 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.344745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG TCACAACCGA CACGCCCATT CCGCAGTCAA ACGACCCTGT GCCGCGCCGC
AAAATCAGTC AGCAGGCCAT TGCACCATGG CTCTTCCTTT TGCCCGCGTT CATCTTTTTC
GCAACCTATG TGTTGTACCC GATTTTCCAG TCATTCTACA TTTCGCTCTA CGAATGGAAC
GGCCTCTATT CGCCGCAGTA TCGTGGCGTT GAAGGCTCTG GATTAACCGA TCAGGCCTGC
CTTGATTTGG GCAACCGCGC GGGCCGCGAA GAAGGGTGCG AGCTGACGGG CAATACCGTC
TGGAATGCCG AATACGTCGG CATGGAAAAC TACGCCAACC TCTATGATGA TCCGTTCTTC
TGGACCTCTC TCAAGAACAA CGTGATCTGG CTGGTGCTCT ACTTCCTCGC CATTCCGGGC
GGGTTGTTCA TCGCTCTGTT CCTGAACCAG AAGGTGTTTG GGATGCGGCT TTACAAGTCG
CTGTTCTTCT TTCCGTTCGT TCTTAGCCAA GTTGTGGTCG GCCTCGTCTT TTCCTGGTTC
ATGTTGCCGG GTGCGGATGA AGGCCTGCTG AACGTGATCC TGGGGTGGTT CAACCTCGGG
CCCGTCAACA TTCTCGGCAG TAACTCCACC GCCACCTACG GCATCATTGC CGCGGGTCTC
TGGCCGCAGA CGGCTTATTG CATGATCCTG TATCTCACGG GCCTGAATGC CGTGGACCCC
GAGCAGATTG AAGCTGCGCG GCTGGATGGC GCAAGGGGAC CCAAGATGCT CTGGTACGTT
GTGCTGCCGC AGCTTTGGCC CGCCACATTC ATCGCCATCG TCGTGACGGT CATCGGGGCT
TTGCGGTCGT TTGACCTGAT CACGATCATG ACCAACGGCG GACCGGGGTT CTACAACACC
TCCGTTCTGG CATTCTACAT GTACGACGTG GCGCTCAGCG AGTTCGGCTT CCGCATGGGC
TATGGCTCGG CCATCGCCGT GATCCTGTTC CTGATCATGA TGGTCTACAT CGCCGGCTTC
CTTTGGAAGA TGTGGCGGGA CGAGAAGGTA TAA
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| Protein sequence | MASVTTDTPI PQSNDPVPRR KISQQAIAPW LFLLPAFIFF ATYVLYPIFQ SFYISLYEWN
GLYSPQYRGV EGSGLTDQAC LDLGNRAGRE EGCELTGNTV WNAEYVGMEN YANLYDDPFF
WTSLKNNVIW LVLYFLAIPG GLFIALFLNQ KVFGMRLYKS LFFFPFVLSQ VVVGLVFSWF
MLPGADEGLL NVILGWFNLG PVNILGSNST ATYGIIAAGL WPQTAYCMIL YLTGLNAVDP
EQIEAARLDG ARGPKMLWYV VLPQLWPATF IAIVVTVIGA LRSFDLITIM TNGGPGFYNT
SVLAFYMYDV ALSEFGFRMG YGSAIAVILF LIMMVYIAGF LWKMWRDEKV
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