Gene Jann_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3833 
Symbol 
ID3936313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3926801 
End bp3927712 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID637906211 
Product2-keto-3-deoxygalactonate kinase 
Protein accessionYP_511775 
Protein GI89056324 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.516302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA ATACGTCATA CGCCGACTGG ATTGCCGTCG ATTGGGGCAC CACCCATCTG 
CGGGCCTGGG CCATGGTCGG CGACGAGGTC CGTGCAGAGG CCAAAAGCGC CGACGGTATG
GGGGGGCTTG ATCGCGACGG GTTCGAGCCC GCGTTGCTGC GCCTGATCGA GCCTTGGTTG
GGTCAGAGCC CCATGCATAT CGTTGCCTGC GGTATGGTCG GCGCACGACA GGGCTGGTTC
GAGGCGCCAT ACACAGCCGT TCCCGCCAAG CCTTGTGACC TTAAGCCTGT CCAAGCCCCA
ACGGTCGACC CGCGCTTGAA TGTCCAGATC ATTCCCGGCC TCAAACAGGC CGACCCCGCG
GATGTCATGC GGGGCGAGGA AACGCAGATC GCGGGCTTTC TCGCGGCACA TAAGAGCTTT
GACGGGGTCC TCTGCCTGCC CGGCACCCAC GCCAAATGGG TGCGTCTTTC GGCCGAAGAG
GTGGTCAGCT TTCAGACCTG CATGACCGGA GAGATGTTTC AGCTGCTTGC TGAGAAATCC
GTCCTGCGCC ACTCGATTGC CGAGGCCGGT GACGATCCAG ACGCTTTCGC GGAGGCCGTT
TCCGACACCA TGTCCCGGCC CGAGAAGCTG TCGCAACGGC TGTTCGGCTT GCGGGCGCAA
AACGTGCTGA ATGGGCAGGA CACCACTACA GCGCGGGCCA AGCTCTCAGG TTACCTGATC
GGGGCGGAGC TTGCCGCAAC CAAGCCCTAT TGGTTGGGTC AGGACGTCGC CATTGCAGGC
AGTCCGGCCC TCGTGGCTGC TTACGCCGAC GCCCTGAAGA CCCAAGGGGT GGACGCGCGT
ATATTCGATG CTGCCCCCCT CACGCGTGCG GGTCTCGCGC ACATGCACCA ATCCTTGACG
GAGTCCGCCT GA
 
Protein sequence
MSGNTSYADW IAVDWGTTHL RAWAMVGDEV RAEAKSADGM GGLDRDGFEP ALLRLIEPWL 
GQSPMHIVAC GMVGARQGWF EAPYTAVPAK PCDLKPVQAP TVDPRLNVQI IPGLKQADPA
DVMRGEETQI AGFLAAHKSF DGVLCLPGTH AKWVRLSAEE VVSFQTCMTG EMFQLLAEKS
VLRHSIAEAG DDPDAFAEAV SDTMSRPEKL SQRLFGLRAQ NVLNGQDTTT ARAKLSGYLI
GAELAATKPY WLGQDVAIAG SPALVAAYAD ALKTQGVDAR IFDAAPLTRA GLAHMHQSLT
ESA