| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3803 |
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| Symbol | |
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| ID | 3936283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3888386 |
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| End bp | 3889336 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906181 |
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| Product | N-acetylmuramic acid-6-phosphate etherase |
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| Protein accession | YP_511745 |
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| Protein GI | 89056294 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2103] Predicted sugar phosphate isomerase |
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| TIGRFAM ID | [TIGR00274] N-acetylmuramic acid 6-phosphate etherase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0010924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000127342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGAGTCG CTGCCGTGTT TACCGCCGTC CAGTCAGATC TTGGGGCACT TGTGTCCGAG
GCGAGCAATT CGCGCTCTGC GGACATTGAT CTGATGACCA CAGCCCAGAT CCTGGCCTGC
ATGAACGCCG AGGATCGTAA AATCGCCGAT GCCGTCGCAG CAGAGCTTCC CGCGATTGCC
CAGACTGTTG ACAGGATCGT CGCAGCGATT GGCCGTGGCG GGCGCCTTAT CTACATCGGT
GCGGGCACCA GCGGTCGTTT GGGCGTATTG GATGCATCTG AATGCCCGCC CACGTTTTCC
GTCCCTCCCG GCATGGTGGT TGGCCTGATC GCCGGTGGCG ACACAGCGCT GCGCACCTCG
GTTGAGGCGG CCGAAGATGA TGAGGCAACG GGTGCGGAGG ACGTGAAAGC CATCGGGCTG
ACAACCAAAG ATGTCGTCAT CGGTATCGCG GTCAGTGGCA GAACCCCCTT CGTGATGGGC
GCGATAGACT ACGCCCGCCG CATTGGCGCG TTCACTGCCG CGCTGACCTG CAACCCAGGC
TCGCCCATGG CGGACCTTGC TGACATCGCG ATCTCACCCG TTGTCGGGCC GGAGGTTGTG
ACCGGCTCCA CGCGCCTCAA ATCCGGGACC GCGCAAAAAA TGATCCTGAA CATGCTGAGC
ACCGCCAGCA TGATCCGCCT TGGTAAGACA TGGGGCAACC GGATGGTGGA TGTGACGATT
TCAAATCGGA AATTGGCGGA CCGCGCCACT GCCATGTTGC GGGATGCCAC CGGGTGCAGC
GCCGATGATG CGCGTACTTT GCTGGACCAA AGCAATGGCA GCGTGAAACT TGCCATCCTG
ATGCAGATTA CGGGCTGTGA CGCAGATGCG GCCCGCGCAA ATCTGGAGGC TGAAAACGGC
TTCCTGCGCA AAGCCATTGA ACGAGCGGAG AAAACTCCGC CGCAAAGCTA G
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| Protein sequence | MGVAAVFTAV QSDLGALVSE ASNSRSADID LMTTAQILAC MNAEDRKIAD AVAAELPAIA
QTVDRIVAAI GRGGRLIYIG AGTSGRLGVL DASECPPTFS VPPGMVVGLI AGGDTALRTS
VEAAEDDEAT GAEDVKAIGL TTKDVVIGIA VSGRTPFVMG AIDYARRIGA FTAALTCNPG
SPMADLADIA ISPVVGPEVV TGSTRLKSGT AQKMILNMLS TASMIRLGKT WGNRMVDVTI
SNRKLADRAT AMLRDATGCS ADDARTLLDQ SNGSVKLAIL MQITGCDADA ARANLEAENG
FLRKAIERAE KTPPQS
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