Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3753 |
Symbol | |
ID | 3936233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3834763 |
End bp | 3835569 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637906131 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_511695 |
Protein GI | 89056244 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.333865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTCA CCGATGCCCC GACCGACACG ACCGTATCCG CCCCCGCGCA GAGCCCTTCT ATCCTTGGCC AGCGCTTGGC CAACGCAGCG CTGCCCGTCG GCACTGCCAT TGCGCTGCTG GTGATCTGGC AAATCGGCGT GCGCCTGTTC GACGTGCCGA CCTACATTGC GCCCGCTCCC TCCGATGTCG GGGCTGTGCT GCGGGACGAA TTCCCACTTT TGATGCGGAA TTTCTGGCCC ACCTTTACCG TCAGCGTCGC GGGGTTTGTC GCAGGCAACG TCGCCGCGAT CCTGATCGCC GTGGCTTTCG TCCACTCGCG CCTGACGGAG CGGGCCTTCT TCCCCATTGC GGTCTTCATC AACACCATCC CGATCCTCGC CATTGCGCCG ATCCTCGTGC TGATCTTCGG ACCGGGCATG ACCGCGAAGG TGATCATCGC GGGCCTGATC TGCTTCTTCC CCACGCTGGT GAACATGGTG CGCGGGCTGC AATCGGTCAG CCCGCAAACG CTGGAACTGG CGCGCATCCT GTCTGCCTCA AAATCCGAGG TGTTCTGGAA AATACGCCTG CCATCGTCGC TGCCGTTTCT CTTCTCCGCC CTCAAAATCG CCGCCACGAC CTGCGTTATC GGAGCGATCG TCAGCGAATG GATCGGCGCG GATGTGGGGC TTGGCGCGCT GATCATCGAC AGCACATTCA ATTACCGCTC ACCCCTGCTT TACGCCACCG TCTTCATGTC TTCGGGCCTG TCGGTGCTGC TGTTCGCGTC GGTGACGATT GCCGAAAAAA TTGTGGTGCG CTGGTAG
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Protein sequence | MAVTDAPTDT TVSAPAQSPS ILGQRLANAA LPVGTAIALL VIWQIGVRLF DVPTYIAPAP SDVGAVLRDE FPLLMRNFWP TFTVSVAGFV AGNVAAILIA VAFVHSRLTE RAFFPIAVFI NTIPILAIAP ILVLIFGPGM TAKVIIAGLI CFFPTLVNMV RGLQSVSPQT LELARILSAS KSEVFWKIRL PSSLPFLFSA LKIAATTCVI GAIVSEWIGA DVGLGALIID STFNYRSPLL YATVFMSSGL SVLLFASVTI AEKIVVRW
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