| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3657 |
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| Symbol | |
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| ID | 3936135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3730286 |
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| End bp | 3732058 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906033 |
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| Product | capsule polysaccharide export protein-like |
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| Protein accession | YP_511599 |
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| Protein GI | 89056148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.219479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.476279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGA AACCCAAGGC TAGGAAGTTC CGCATCCGTC GCACAGACGG TACAGCCCCT
GTCGGTGAAA CCCGCGGGGC GGAGTCCGCT GACGCACGTG AAGATGCACC CACCGCACCA
AGGCCAAACC CGGCCCCTGC GGCGCGCGCG CCCGCTGATG CGGAAGACAC CAGCCTGCCT
AATGTGACCG AGGACGGGTT TGGCGACATG GCCCTGCCCG GCTCTGCCGC GGCCGACCGC
GCGCAAGCAG CAGCAGGCAA CTCAGGCACG TCTGTCGAGG CAGAGCTGGC CGCAATCCGG
GCTGAGGGGC TAACCGGTCG TCAACTGCGC ATGGCGCGGC GCGCGGCACA AAAACACGGC
CTGTCCCCGG CGTCGGATTT TGACGCGGTC CGCCAATTGC GCATGCGTGG GCTGGACCCG
TTTGGCCAAT CCAACATGTT GGAGTTGGTG GTCAATGAGA CCTCGGGCGC GGGCAATCCC
GCCGGTGCAT CGGCCACTGG CGCGGCGGCG GCTGGAACCA CACTGCCCGT GCGCGCCGCC
ACAGCCCAGG TGCCCGCCAC CCAGGTGGCA GCCCCGCCGC CGCCCGCAGG TATCGCCCAT
ACCGCCGACA CCCGCGCCGC GGAGATCATG AACGTGCAGC GCGACATCGC CAACCGGCGG
CGTCGCAAAC TGGTCCAACT GGCCACCCGA CTGGCCCTGT TCGTGTTGCT GCCAACGATG
CTGGTTAGCT ATTATTATTA CGCCGTCGCC ACACCGCTTT TCGCCACAAA TACCGAGTTT
GTAATCCAAA AAGCCGATGG GCCAGCGGGC GGTGGCGGCG GGTCTGGTGG ACTTGGTGGA
ATACTGGGGG GCAGCAGTTT CGCGACCGTG CAGGAATCGA TCACCGTTCA AAGCTACCTG
GAAAGCCGCG AGGCCATGCT GCGCCTGGAT GAGGAGTTGG GGTTTCGCGA TCACTTCTCG
GGCGAGAACA TTGATCCGCT TGTGCGTCTG GCACCCGATG CAACGGACGA GCAGATGTAC
AAGACCTACA GTCGTAACCT GACGATCGGA TATGACCCGG TCGAAGGGAT CGTGCGGATG
GAGGTGCTGG CCGCCGATGC TGCGACCTCT CAAGCCTTTT CGCAAGCCCT GATCACCTAT
GCGGAAGAGC GGGTGGACCA GATGTCATCG CGTCTGCGCG AAGATCAGAT GGCCGGCGCA
CGCGAGGGAT TTCAGGAGGC CGAGGACCGG TCGCTGACGG CACAGATGCG CGTGCTGGAA
TTGCAGGAAC AACGCGGCGT TCTGTCGGCG GAGGCCGAGG TCAGCCAGGT CTTCAACCAG
ATCGGCAACT ACGAATTGCA ACTCACCGAA GAGCGTCTGC GCCTGGCCGA AATCTCTGCC
GCCTCCCGGC CCAATGCGAC GCGGGTCCAG GTGGCCGAGG CGAATATCGC GCGCCTTGAG
GCCCTGATTG ACGAGCTGCG CGCCTCTCTC ACCGACGATG GCGAGGGAGA GGTTTCGCTT
GCACGTATCC AGTCCGAACT GGTCATCGCT CAAGCCGATC TTGAAACGCG CCAGCTTATG
TTGACTGAAG CGCTACAAGC AATGGAATCG GCCCGGGTCG AGGCCAACCG CCAGACGCTT
TACATCTCCA TGGGTGTCTT CCCGATCGCC CCCGATGAGG CCGCTTATCC GCGGGCCTTT
GAGAAGACGC TGCTTGCACT TGTCGTCTTT TCTGGCATCT ACCTTCTGGT ATCGATGACC
GCCTCGATCT TGCGGGAACA GGTAAGCTCC TGA
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| Protein sequence | MTTKPKARKF RIRRTDGTAP VGETRGAESA DAREDAPTAP RPNPAPAARA PADAEDTSLP
NVTEDGFGDM ALPGSAAADR AQAAAGNSGT SVEAELAAIR AEGLTGRQLR MARRAAQKHG
LSPASDFDAV RQLRMRGLDP FGQSNMLELV VNETSGAGNP AGASATGAAA AGTTLPVRAA
TAQVPATQVA APPPPAGIAH TADTRAAEIM NVQRDIANRR RRKLVQLATR LALFVLLPTM
LVSYYYYAVA TPLFATNTEF VIQKADGPAG GGGGSGGLGG ILGGSSFATV QESITVQSYL
ESREAMLRLD EELGFRDHFS GENIDPLVRL APDATDEQMY KTYSRNLTIG YDPVEGIVRM
EVLAADAATS QAFSQALITY AEERVDQMSS RLREDQMAGA REGFQEAEDR SLTAQMRVLE
LQEQRGVLSA EAEVSQVFNQ IGNYELQLTE ERLRLAEISA ASRPNATRVQ VAEANIARLE
ALIDELRASL TDDGEGEVSL ARIQSELVIA QADLETRQLM LTEALQAMES ARVEANRQTL
YISMGVFPIA PDEAAYPRAF EKTLLALVVF SGIYLLVSMT ASILREQVSS
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