| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3585 |
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| Symbol | ihfB |
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| ID | 3936060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3664377 |
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| End bp | 3664664 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637905960 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_511527 |
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| Protein GI | 89056076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0516176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACGCT CCGAGCTGAT TCAAAAGCTT TCCGACGAAA ACCCGCACCT CTATCAGCGT
GACGTCGAAC GGATCGTGAA TTCGATTTTC GAAGAAGTTA TCGATGCCCT CGCGGCGGGG
GATCGGGTGG AATTGCGCGG CTTCGGGGCG TTTTCGGTCA AGAAACGCGA CGCCCGTATC
GGCCGCAACC CGCGGACGGG TGAAAGTGTC TCGGTGGAAG AAAAGCACGT GCCTTTCTTC
AAGGCTGGGA AACTGCTACG CGACAGACTA AATGGTCACG AAAGCTAA
|
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| Protein sequence | MIRSELIQKL SDENPHLYQR DVERIVNSIF EEVIDALAAG DRVELRGFGA FSVKKRDARI
GRNPRTGESV SVEEKHVPFF KAGKLLRDRL NGHES
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