Gene Jann_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3562 
Symbol 
ID3936037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3626463 
End bp3626906 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content58% 
IMG OID637905937 
Producthypothetical protein 
Protein accessionYP_511504 
Protein GI89056053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.558443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CAGCAGACCT GAACCACACC ACCGATGCCA TTGATGCGGT GTCCAAGGTC 
ACCACTGACG TCGCCGATGT GATGGATGGC TACGCCGCCA TGCTGGACCG CGCCGAGGAT
GATCTGAAAC CATTCATTGA GCGTTTGCAC ATCCTGCATT CCACGCATCT GGTCGCGCTG
AAGCCGCATC TCGACACGAT CGGCGGCAAT TCCAGCCAAA CGGGCTCTGC CATGGGATAT
GTCCACCAAG CGGTCGCAAC CGTGCGCGAC TGGGTCGGTA AGCTGGATGC GTCAGCTCTG
CCGCAGATTG CTGATGGCGA AGAGATGATC GTTGACAGCT ACACCGAGGC TGTGCAGGCC
ACCAAGCCGA ATACGCCAAT CAACCTTCTG CTGGATGAGC AGCGCAGCGC ATTGCGCGCA
CAAATTGCAG TTTTGAAGGC GTAG
 
Protein sequence
MTAPADLNHT TDAIDAVSKV TTDVADVMDG YAAMLDRAED DLKPFIERLH ILHSTHLVAL 
KPHLDTIGGN SSQTGSAMGY VHQAVATVRD WVGKLDASAL PQIADGEEMI VDSYTEAVQA
TKPNTPINLL LDEQRSALRA QIAVLKA