Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3550 |
Symbol | |
ID | 3936025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3613568 |
End bp | 3614230 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637905925 |
Product | hypothetical protein |
Protein accession | YP_511492 |
Protein GI | 89056041 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA AATCTCGATC CTTCGCAGTT ATCGGTCTGG GCACATTTGG GAGCACGGTG GCGAAGGAGC TGTCGCGCTT TGGCAACGAT GTCATCGGGA TTGATGTGAA CGACAAGCTG GTCGCAGCCC ATGCCGAAGA TCTTGGCCAG GCGCTGATCC TTGATGCACG CGAAGACGGC GCGTTGAAGG AGGCCGGTGT GGACTCGGTT GATGTTGGCG TCGTCGCGAT TGGCACTGAT ATCGAGGCGA GCATCCTGAG CATCATCAAT CTCAAGACAC TCGGGGTTGA GACCGTCTGG GCGAAGGCCA CGTCGAAAAG CCACCACCGC ATTCTGTCAA AACTCGGTGT GGACCGGGTC ATCCATCCGG AGAAGGAGGT CGGTCAACAT ATCGCACAGG TGCTGCACAA TCCGCTGGTG CGCGACTACG TCAGCCTGGG CAATGGCCAG CATGTCGTGA ATTTTCGGGT GCCCGACAGC CTGCAAGGCA AAACGCTGAC GCAGCTGCCT CACGACAACA AATTCAATCT GCGGTGTGTC GGGGTGATGC GTGGCTCCAA ATTTCTGGGA CATGACGGCA CAGACTGCGA ATTGCACGTG GACGATCTGC TGTTGCTGCT TGGCGAGCGG CAGGACCTGC GCGAATTTGC CGGTAGCCTT TGA
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Protein sequence | MAKKSRSFAV IGLGTFGSTV AKELSRFGND VIGIDVNDKL VAAHAEDLGQ ALILDAREDG ALKEAGVDSV DVGVVAIGTD IEASILSIIN LKTLGVETVW AKATSKSHHR ILSKLGVDRV IHPEKEVGQH IAQVLHNPLV RDYVSLGNGQ HVVNFRVPDS LQGKTLTQLP HDNKFNLRCV GVMRGSKFLG HDGTDCELHV DDLLLLLGER QDLREFAGSL
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