| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3543 |
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| Symbol | |
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| ID | 3936018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3606965 |
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| End bp | 3607729 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637905918 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_511485 |
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| Protein GI | 89056034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.372854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTT CGATGTCAAA TACAGCCCAA AAGTCCGTGG GGATCGTTGG GTTTGGAGCT
TTCGGAAAAC TGATTGCTCA GAGCCTGCAT GGGCATTTTG ATTTGAAGGC CCACGACCCG
CGATCAGACC ATCACGATGT TGCAGCCAAC CTCGGTGTAC GTTTCACTTC TCTTGAAGCT
GTCGCACGTT GCGACATGAT CGTGATCGCG GCACCGGTAT CGAGCTTCGA AGACGTTTTG
GTCTCGATTG CCACCGTCTG TCGTCCCGGG ACGTTGGTAA TTGATGTCGG ATCTGTCAAA
GTGCATCCCG CTGATCTGAT GGAGAAACAC CTGCCGGACT ACGTCAATAT TGTCGCGACC
CATCCGTTAT TTGGGCCGCA AAGTGCCTGC GATGGCATCA AGGGGCTAAA AATTGCCGTT
TGTCCAATTC GAGGGCTGAA GCATTGGCCA CTCGCGGTGT TTCTCCGCAA ACATCTTGGC
CTTCAGGTCA TCATGACGAC ACCCCACGAT CACGACCGGG AAGCGGCAAC AGTTCAGGGT
TTGACGCATC TGATTGCCAA GGTATTACAG AGAATGGGGC CTCTACCTTC CAGAATGACG
ACCCGGAGCT TCGACCTGCT CGTTGAGGCC GTTTCGATGG TGCAAACCGA TGCTCCGGAA
GTGTTTGATG CAATAGAGAA GGCGAATCCT TATTCGGCTG ACATCAGGCG GAGTTTTTTC
GAATTGGCTC ACAAACTGAG CGTTGAGTTG GAAAGCAACG TGTAA
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| Protein sequence | MNTSMSNTAQ KSVGIVGFGA FGKLIAQSLH GHFDLKAHDP RSDHHDVAAN LGVRFTSLEA
VARCDMIVIA APVSSFEDVL VSIATVCRPG TLVIDVGSVK VHPADLMEKH LPDYVNIVAT
HPLFGPQSAC DGIKGLKIAV CPIRGLKHWP LAVFLRKHLG LQVIMTTPHD HDREAATVQG
LTHLIAKVLQ RMGPLPSRMT TRSFDLLVEA VSMVQTDAPE VFDAIEKANP YSADIRRSFF
ELAHKLSVEL ESNV
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