| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3506 |
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| Symbol | |
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| ID | 3935980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3561189 |
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| End bp | 3562418 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905880 |
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| Product | hypothetical protein |
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| Protein accession | YP_511448 |
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| Protein GI | 89055997 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5441] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.352048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000728934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCGACA AAACCATCCT TGTGATCGGC ACCTACGACA CCAAGGACGC AGAGCTTGGG
TTTCTGGCCG ATGTGATCCG CGACCAGGGC GGGCGGGTGC TGACCATGGA CGTCTCGGTC
CTCGGCGCGC CGTCGATGCC GTGCGATCTA TCCAAGCATG ATGTGGCCGA AGAGGGGGGC
AGCAGCATTG AGGCAGCCAT CGCGTCGGGC GATGAAAACA CTGCGATGCA GATCATGGCG
CGTGGCGCGT CGCTGCTGGT GGCCCGCCTC TATGCCGAAG GGCGCTTTGA CGGGATGGTC
GTGCTGGGGG GCACGATGGG CACCGATCTG GCGCTGGACG TCTGCACAGC CTTGCCGCTC
GGCGTGCCGA AATACATCGT GTCGACTGTG TCATTTTCCC CGCTGATCCC GGCGGAAAGG
CTCGCGGCAG ACACGCAGAT GATCCTTTGG GCGGGCGGGC TTTACGGCTT GAACTCGGTC
TGCAAAGCAT CCCTGTCCCA GGCGGCGGGG GCCGTGCTGG GGGCCGCACG GGCGGTCCAG
AAGCCGGACC CCGATAAGCC GCTGATCGGC ATGATGTCCC TTGGGACCTC GGCGTTGAAA
TATGTGATCC CCCTGAAGCC TGCCCTGGAA GAGCGCGGCT ATGAGGTGGC CGTGTTCCAC
GCCACGGGCA TGGGCGGGCG AGCGTTTGAG AGCCTCGCCG CCCAGGGGGC GTTTGCCTGC
GTGTTCGATT TCTGCACGCA GGAACTGGGC AACCATATCC ATGGCTCCAA CATTTCCGCC
GGGGCGGATC GCCTGACCAA CGCGGGCGCA TCCGGCACGC CGCAGATTGT CGCGCCGGGC
TGCTATGATC TGGTGGACAT CGTGGGCTGG CAGCCCGTCC CAGAGAAATG GACCGACCAC
CTGAGCCATG CGCACAACCG CCTGCTGACC TCCATCGTGT TGAACACAGA AGAACGTCGT
GAGGTCGCCC GTGCCCATGC CGTGCAACTG GCGACGGCCA AGGGCGCCAC GGCAGTGATC
CTGCCCCGCC ACGGTTTGGG AGAATGGGAC CGCGAGGGTG CGGATCTGCA TGACCAAGAG
GGCCTCAACG CCTTCCTGGC CGAATTGTCG CGGGCCCTGC CAGCCAACGT CCAAGCGCAT
GCAATCGACG CCCATATCAA CGACGCGCTC TTTGCCGACA CCGCCCTTAC GATCTTTGAC
CAGTGGTGTG CCGAGGGCTT AGTCCCGTGA
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| Protein sequence | MTDKTILVIG TYDTKDAELG FLADVIRDQG GRVLTMDVSV LGAPSMPCDL SKHDVAEEGG
SSIEAAIASG DENTAMQIMA RGASLLVARL YAEGRFDGMV VLGGTMGTDL ALDVCTALPL
GVPKYIVSTV SFSPLIPAER LAADTQMILW AGGLYGLNSV CKASLSQAAG AVLGAARAVQ
KPDPDKPLIG MMSLGTSALK YVIPLKPALE ERGYEVAVFH ATGMGGRAFE SLAAQGAFAC
VFDFCTQELG NHIHGSNISA GADRLTNAGA SGTPQIVAPG CYDLVDIVGW QPVPEKWTDH
LSHAHNRLLT SIVLNTEERR EVARAHAVQL ATAKGATAVI LPRHGLGEWD REGADLHDQE
GLNAFLAELS RALPANVQAH AIDAHINDAL FADTALTIFD QWCAEGLVP
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