Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3482 |
Symbol | |
ID | 3935956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3535301 |
End bp | 3536200 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637905856 |
Product | AraC family transcriptional regulator |
Protein accession | YP_511424 |
Protein GI | 89055973 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.675068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.589184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG AACATTCCGA CAGCTTCGCA TGCCCGACAG AATACTACCA AAATCCGTTG CTGCGCCACC TGCCGCAAGA GCATCGGACC GGCGGCAGTT TTGATGTGAA GATGTTCACC ATCGAGCAAT GCGATTTTGA AGCCACGGAC CCGCCTTTCG ATGTGTTTAC GGTGACCGCC GTGATCGAGT CCGAGATGAA GAACTGCCGG GTCGATTTTG GCGACGGGTG GGTCGAACAT GATATCGTGC GGGAGGGGCA GTTTGGCCCC CAACCGGCAG CGCAGGAATG CAGTTTTGAG CTGCCCGGCC CGCATCACAT GCTGAATGTG TCGCTGCCGA TTTCAAACGC GCAGGAGCTG CTGCTGTCGG CGGGGTTCGA TACCGATCCG TTCTGCGCGC TTTATGGTCA TATGTCGGAT CATCCGCGGG GTCTGCTGTT GATGAAAACG ATGTGGAACG CGATGAAAAA CGGCGGTCCG GCCAACAACC TCGCAGTTGA TGCCGCCCTG ATCCAGCTGA TGTTGACGAT GATCGAGGGG GCCGGTCTGG CCGAGCATCT TGTGCCCCCG CCACAGCTTG CCAATCCGCA ACTGGCCCGC GTGATTGACT ATATCGAGAC CTATTACCAT GCCTCGCTTC TTACATCTGA ACTGGCAGCC ATTGCCGCCA TGTCGACGGT GCATTTCGGA CGCTGTTTCA AGACGGCAAC CGGCGCGTCA CCCCACGCCT ATGTCATGGG TCGCCGCGTT GAGCATGCCA AATACATGCT GCGGGACGCC ACGCTGAACA TCACGCAGAT CGCCTATGCC TGCGGGTTTT CCAGTGCTGC GCATTTCTCA ACTGTGTTCA AGGCCCAGGT CGGTATCACG CCATCAGCCT ACCGCAAGGC CATCACCTAA
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Protein sequence | MKFEHSDSFA CPTEYYQNPL LRHLPQEHRT GGSFDVKMFT IEQCDFEATD PPFDVFTVTA VIESEMKNCR VDFGDGWVEH DIVREGQFGP QPAAQECSFE LPGPHHMLNV SLPISNAQEL LLSAGFDTDP FCALYGHMSD HPRGLLLMKT MWNAMKNGGP ANNLAVDAAL IQLMLTMIEG AGLAEHLVPP PQLANPQLAR VIDYIETYYH ASLLTSELAA IAAMSTVHFG RCFKTATGAS PHAYVMGRRV EHAKYMLRDA TLNITQIAYA CGFSSAAHFS TVFKAQVGIT PSAYRKAIT
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