Gene Jann_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3482 
Symbol 
ID3935956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3535301 
End bp3536200 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content58% 
IMG OID637905856 
ProductAraC family transcriptional regulator 
Protein accessionYP_511424 
Protein GI89055973 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.675068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.589184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG AACATTCCGA CAGCTTCGCA TGCCCGACAG AATACTACCA AAATCCGTTG 
CTGCGCCACC TGCCGCAAGA GCATCGGACC GGCGGCAGTT TTGATGTGAA GATGTTCACC
ATCGAGCAAT GCGATTTTGA AGCCACGGAC CCGCCTTTCG ATGTGTTTAC GGTGACCGCC
GTGATCGAGT CCGAGATGAA GAACTGCCGG GTCGATTTTG GCGACGGGTG GGTCGAACAT
GATATCGTGC GGGAGGGGCA GTTTGGCCCC CAACCGGCAG CGCAGGAATG CAGTTTTGAG
CTGCCCGGCC CGCATCACAT GCTGAATGTG TCGCTGCCGA TTTCAAACGC GCAGGAGCTG
CTGCTGTCGG CGGGGTTCGA TACCGATCCG TTCTGCGCGC TTTATGGTCA TATGTCGGAT
CATCCGCGGG GTCTGCTGTT GATGAAAACG ATGTGGAACG CGATGAAAAA CGGCGGTCCG
GCCAACAACC TCGCAGTTGA TGCCGCCCTG ATCCAGCTGA TGTTGACGAT GATCGAGGGG
GCCGGTCTGG CCGAGCATCT TGTGCCCCCG CCACAGCTTG CCAATCCGCA ACTGGCCCGC
GTGATTGACT ATATCGAGAC CTATTACCAT GCCTCGCTTC TTACATCTGA ACTGGCAGCC
ATTGCCGCCA TGTCGACGGT GCATTTCGGA CGCTGTTTCA AGACGGCAAC CGGCGCGTCA
CCCCACGCCT ATGTCATGGG TCGCCGCGTT GAGCATGCCA AATACATGCT GCGGGACGCC
ACGCTGAACA TCACGCAGAT CGCCTATGCC TGCGGGTTTT CCAGTGCTGC GCATTTCTCA
ACTGTGTTCA AGGCCCAGGT CGGTATCACG CCATCAGCCT ACCGCAAGGC CATCACCTAA
 
Protein sequence
MKFEHSDSFA CPTEYYQNPL LRHLPQEHRT GGSFDVKMFT IEQCDFEATD PPFDVFTVTA 
VIESEMKNCR VDFGDGWVEH DIVREGQFGP QPAAQECSFE LPGPHHMLNV SLPISNAQEL
LLSAGFDTDP FCALYGHMSD HPRGLLLMKT MWNAMKNGGP ANNLAVDAAL IQLMLTMIEG
AGLAEHLVPP PQLANPQLAR VIDYIETYYH ASLLTSELAA IAAMSTVHFG RCFKTATGAS
PHAYVMGRRV EHAKYMLRDA TLNITQIAYA CGFSSAAHFS TVFKAQVGIT PSAYRKAIT