Gene Jann_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3436 
Symbol 
ID3935910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3482206 
End bp3482976 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID637905810 
Productalpha/beta hydrolase 
Protein accessionYP_511378 
Protein GI89055927 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC CCATGTTGGA AACCTACACC TTTGGGGCCG AGGGCTCTGC CCCGCCGATC 
CTGATCGCCC ACGGTCTGTT CGGGTCGGCC CGCAACTGGA ACGTCATCGC CAAGCGCCTG
GCGGAGGAGC GTTTTGTGAT CAGCGTCGAC ATGCGCAACC ATGGGGCCAG TCCCTGGACT
GCGCCCCACA CCTATGGCGC AATGGCGGAT GATCTGGCTG AAATCATTGA TAAAATTGGT
GGACGGGCGG ATGTGATCGG CCATTCCATG GGTGGCAAGG CGGCGATGGT TCTGGCGCTG
ACGCACCCCG TATCGGTGCG CAAACTGGTC GTGGCCGACA TCGCGCCGGT GGCCTATGAG
CACACGCAGC AGGGCATGAT CGACGCGATG CGGGTTGTGG ATCTGTCGAT TGTCGAGACC
CGTGGCGACG CGGACCGACA GCTGGCACGG GCGGTTGAGG AACCCGGCGT GCGGGCATTT
CTCCTGCAAT CCCTGGACGT TAGGGAGAGG CGCTGGCGGT TCAACCTGGA TCAGTTGGAG
GCCGATATGC CCGCGATCCT GGGCTTTCCG GACGACGTGG ACGGCCCGTT TGAGGGCGAC
GTCCTGATGC TGTCAGGCAC CGCGTCCGAC TACGTTTTGC CAGACCACCG CGACACCATC
AAACAGCTCT TCCCCGCCGC GCGGTTTGCG AAAATCCCCG GTGCGGGGCA CTGGCTCCAC
GCCGAAAAAC CGCGCGAGTT CGAGGCCGCA ACAGCCGCGT TTCTGGGGTG A
 
Protein sequence
MPDPMLETYT FGAEGSAPPI LIAHGLFGSA RNWNVIAKRL AEERFVISVD MRNHGASPWT 
APHTYGAMAD DLAEIIDKIG GRADVIGHSM GGKAAMVLAL THPVSVRKLV VADIAPVAYE
HTQQGMIDAM RVVDLSIVET RGDADRQLAR AVEEPGVRAF LLQSLDVRER RWRFNLDQLE
ADMPAILGFP DDVDGPFEGD VLMLSGTASD YVLPDHRDTI KQLFPAARFA KIPGAGHWLH
AEKPREFEAA TAAFLG