| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3380 |
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| Symbol | |
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| ID | 3935853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3433042 |
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| End bp | 3433809 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905753 |
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| Product | hypothetical protein |
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| Protein accession | YP_511322 |
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| Protein GI | 89055871 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCC ACTCAAAATG GGCGAACATC CAACACCGCA AGGGACGGCA GGACAAGCTG
CGCGCCAAGG TGTTCTCGAA GATGTCCAAG GAGATCACCG TCGCCGCGAA GATGGGCGAC
CCGGACCCCG ACAAGAACCC GCGCCTGCGC CTGGCGGTGA AAGAGGCCAA AAGCGTCTCC
GTCCCCAAGG ACGTGATTGA GCGCGCGATT GCGAAGGCGA CGGGCGGCGA CAGCGAAAAC
TACGATGAGA TCCGCTATGA GGGCTATGGC CCCAACGGCG TGGCCGTGAT CGTGGAGACG
ATGACCGACA ACAAGAACCG CACCGCCTCC ACCGTGCGCT CGACCTTCAC CAAGAATGGT
GGGAACCTGG GCGAGACCGG CAGCGTGGGC TTCATGTTCG ACCGCAAGGG GCAGGTGACC
TACCCGCTGT CGGCGGGCGA TGCGGATACG ATTATGATGG CCGCGATTGA GGCGGGCGCG
GAAGATGTGG AGACCAACGA AGGCGACGGG GACGAGGATC TGGGCGGCCA TGTGATCTGG
TGCGCGGATA CGGATTTGAA TGACGTGTCC AATGCGCTGG AGGCTGACCT GGGTGAGAGT
GAATCCACCA AACTGGTCTG GCGTCCGACG ACAACGACGG AGCTTGGCCT GGAGGACGCG
CAGAAGCTGA TGCGCCTGAT CGATGCCCTG GAAGAGGATG ACGATGTCCA GACCGTCACG
GCCAACTTTG AGATCTCCGA TGAGGTGATG GCGCAGCTGT CCGAATGA
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| Protein sequence | MAGHSKWANI QHRKGRQDKL RAKVFSKMSK EITVAAKMGD PDPDKNPRLR LAVKEAKSVS
VPKDVIERAI AKATGGDSEN YDEIRYEGYG PNGVAVIVET MTDNKNRTAS TVRSTFTKNG
GNLGETGSVG FMFDRKGQVT YPLSAGDADT IMMAAIEAGA EDVETNEGDG DEDLGGHVIW
CADTDLNDVS NALEADLGES ESTKLVWRPT TTTELGLEDA QKLMRLIDAL EEDDDVQTVT
ANFEISDEVM AQLSE
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