Gene Jann_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3374 
Symbol 
ID3935847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3426282 
End bp3427814 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content62% 
IMG OID637905747 
Productcarboxyl transferase 
Protein accessionYP_511316 
Protein GI89055865 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.778087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TTCTGGAACA GCTTGACGCG CGGCGCGCCC AGGCGCGTGC GGGCGGTGGC 
GAAAAGCGCG TCGCAGCACA GCACGCCAAG GGCAAGCTGA CCGCGCGGGA GCGGATCGAA
CTGCTTCTCG ACGAGGACAG TTTCGAGGAA TACGACATGT TCGTCGCCCA TCGCACGACG
GAATTCGGGA TGGCCACCAA CCGTCCGCCC GGCGACGGCG TGATCACCGG CTGGGGCACG
GTCAATGGGC GTCAGGTCTA CGTCTATAGC CAGGATTTCA CGGTGCTCGG CGGCTCGGTC
TCCGAAACAC ACGGCCAGAA GATCTGCAAG ATCATGGACA TGGCGGTGCA AAATGGCGCG
CCTGTTGTGG GCATCAACGA TTCGGGCGGG GCCCGCATCC AGGAAGGCGT CGATGCGCTT
GCCGCCTACG GCGAAGTCTT CCAGCGCAAT ATCGAGGCGT CCGGCGTGGT GCCGCAGATC
TCCCTGATCA TGGGGCCTTG CGCGGGTGGG GCGGTCTATT CCCCCGCCAT GACGGATTTC
ATCTTCATGG TCAAAGACAC GTCTTACATG TTCGTGACCG GCCCCGATGT GGTGAAAACC
GTGACGAATG AAGTGGTGAC TGCGGAAGAA TTGGGCGGGG CGTCCACCCA TACCCGCAAA
TCCTCAGTTG CCGATGGAGC GTTTGAAAAT GACGTGGAGG CGCTTGGCGA AGTGCGGCGC
CTGATCGACT TCCTGCCGCT GTCCAACCGC GAAAAGCCCC CCGTCAGGCC GTTTTTCGAC
AGCCCCGACC GGATCGAGAG CAGCCTCGAC ACGCTTGTCC CCGACAACCC CAATCAGCCC
TATGACATGA AGGAGCTGAT CACCAAGCTC GCCGATGAGG GGGATTTCTA CGAGATCCAG
GAGGATTTCG CCGGTAACAT CCTGACCGGG TTCATCCGGC TGGAAGGCCA GACCGTCGGC
GTCGTTGCGA ACCAGCCGAT GGTGCTGGCG GGGGTCCTCG ACATCGACTC GGCCCGGAAA
GGTGCGCGGT TCGTGCGCTT CTGTGACTGT TTCGAGATCC CGATCCTGAC GCTTGTCGAC
GTTCCGGGGT TTCTGCCCGG GGTCAGCCAA GAATATGGCG GCGTGATAAA ACACGGGGCC
AAACTGCTTT TCGCCTATGG TGAAGCGACC GTGCCCAAGG TGACCGTGAT TACGCGCAAG
GCCTATGGTG GCGCGTATGT TGTGATGGCG TCCAAGCATT TGCGCGCCGA TGTGAACTAC
GCCTGGCCGA CCTCGGAGAT CGCGGTGATG GGGGCGAAAG GCGCCGTGGA GATCCTGCAC
CGCGCGGATG CGGGTGATGC CGACAAGACC GCCGCCCACA CCAAGGAATA TGAAGACCGC
TTCGCCAACC CGTTCGTAGC TGCCGAGCGC GGTCACATCG ACGAGGTGAT CCAGCCCCAT
TCGACCCGCA GACGTGTGTG CCGCGCCTTT GCCGCGCTTC GACGCAAGGA AAAGAAGATG
CCGTGGAAAA AACACGACAA TATCCCGCTA TGA
 
Protein sequence
MTDILEQLDA RRAQARAGGG EKRVAAQHAK GKLTARERIE LLLDEDSFEE YDMFVAHRTT 
EFGMATNRPP GDGVITGWGT VNGRQVYVYS QDFTVLGGSV SETHGQKICK IMDMAVQNGA
PVVGINDSGG ARIQEGVDAL AAYGEVFQRN IEASGVVPQI SLIMGPCAGG AVYSPAMTDF
IFMVKDTSYM FVTGPDVVKT VTNEVVTAEE LGGASTHTRK SSVADGAFEN DVEALGEVRR
LIDFLPLSNR EKPPVRPFFD SPDRIESSLD TLVPDNPNQP YDMKELITKL ADEGDFYEIQ
EDFAGNILTG FIRLEGQTVG VVANQPMVLA GVLDIDSARK GARFVRFCDC FEIPILTLVD
VPGFLPGVSQ EYGGVIKHGA KLLFAYGEAT VPKVTVITRK AYGGAYVVMA SKHLRADVNY
AWPTSEIAVM GAKGAVEILH RADAGDADKT AAHTKEYEDR FANPFVAAER GHIDEVIQPH
STRRRVCRAF AALRRKEKKM PWKKHDNIPL