| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3319 |
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| Symbol | |
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| ID | 3935792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3372677 |
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| End bp | 3373333 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905692 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_511261 |
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| Protein GI | 89055810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00928337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.175337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGTG TTGGCAAACT GCTGGTCGCG GCCTTTATCC TGACCCTCGG CGTCGCCATT
GCCATCGGTG CGGTGGGCTT TTTCAACGCG CGCGCGGATG CTGATGCGCT GATCGCCCGG
GCCGATGCCC TGATCGCGCA AGGGCGGGAC GGCGAGGCGT TGGGTGCCAC GCGGCTGGCC
ATGCTGATCC GCGTGCAGGA CCCGGGCTTT GCCGATCACA ACGGGCTGGA CCTTTGGACG
CCCGGCGCAG GCATCACGAC GATCACCCAA TCGCTCGCCA AGCGGGTGGC GTTTGATGAC
TTCCAGCCCG GCATCGCGAA ACTGCGCCAG ACCACCTATG CGATGGGGCT GGAAACGCGG
CTCAGCAAGA CGCAGATCCT GGCGCTGTGG CTTGATACCG TGGAAATGGG GCGCGGCCCG
GACGGCTGGA TCACCGGGTT TTTCGCAGCA AGCGAGGCGA TCTTCGGCGC GCCCCCGGAC
CAGATATCAG AGGCCGAGTT CCTTCACCTG ATTGCTGTGC TGATCGCGCC CGGCCGCTAT
GATCTGATGG GCGAGGACCC GGCGCTTGAC GCCCGCGTGG CGCGGATTGA GCGGTTGATC
GCGGGCACCT GCACGCCGCA GGGCAACGGC GACGTGCGCC TGGACGGCTG CGCCTGA
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| Protein sequence | MRRVGKLLVA AFILTLGVAI AIGAVGFFNA RADADALIAR ADALIAQGRD GEALGATRLA
MLIRVQDPGF ADHNGLDLWT PGAGITTITQ SLAKRVAFDD FQPGIAKLRQ TTYAMGLETR
LSKTQILALW LDTVEMGRGP DGWITGFFAA SEAIFGAPPD QISEAEFLHL IAVLIAPGRY
DLMGEDPALD ARVARIERLI AGTCTPQGNG DVRLDGCA
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